RNA id: AMCG00000206


Basic Information

Item Value
RNA id AMCG00000206
length 891
RNA type mRNA
GC content 0.50
exon number 2
gene id AMCG00000206
representative True

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 6670213 ~ 6671949 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TTCTGTGTGTTCGAGGAAGACAGCGAGGAGTCCTGCGATGTTACGAAGGAGGACCTCTCTTCATCCTTTAATGCAGCAGAATCCAAAGAAGCTGTTTCAGTTGACACCAAGCCAACAGTGCCTTCTCAATCCAAAAGCCAAGATGTGCCTGCCAGCAACAAAACACCAACTACAAATACAGGTTCCCCCACCAAGAGTGTTACCCCACTGCCTGCCACTCCAGGGGAGAAAGTATTTCAGTTGCCTGCCTTGTTCAGTGGGCTCAGGGTGCTTAAGAAGGGAGCGCTCGGAGAAGAAAGGGAAACTGTTTCTGAGATCAAACAAAGAGACACTGATCTGGCCATGCTGAATCTGAAAAAGCCTGTCAACAAAGCCAAATTCCTCCCCGAGCAGCTGCCGAAGAAGCGGGAACCAAAAGGTGTGCCTGAGCAGAAAGGCAACCTCCTGGAGCAGCTCACCCAACTGCTGAACCTGGATGGGTCCAAAAGCGAAGCAAAGAGTGACCTCTCCGAGGAGACTGGCGAAAGCAAGGACACTGATGACAAAACCAGCCCGAAGGCCGAGCAGAGCCCCGATGGCAGTCCCACTGCTTTTGATGCCTTCAAATCGTTCTTCACACCGAAGCCTGTGAAAAAGGAAGCAGCGGACCCTATAGACTTGGatgcagtgaaaagaaaaataaaaaatgacaaagagGTGCTTAAAGCCATATTTGAGAGATCTACGTCCAGACCAGGACCAGCTGACAAGAGTCCAGTTGACATGAAGGGATCAGAGGTGACATCTCCTACCGACAGTGAGGACAGGACACCTGGGCGTCTGCAGGCTGTCTGGCCTCCACCAAAACCAAaggatgaagaagaaaaagttgGCTTGAAGTACACAGAAGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU187110 lncRNA downstream 106908 6556705 ~ 6563305 (-) False G148692
TU187113 lncRNA downstream 106908 6557842 ~ 6563305 (-) True G148692
TU187002 lncRNA downstream 521927 6147929 ~ 6148286 (-) True G148610
TU186961 lncRNA downstream 657576 6004186 ~ 6012637 (-) False AMCG00000180
TU187241 lncRNA upstream 468413 7140362 ~ 7140968 (-) True G148801
TU187436 lncRNA upstream 1086733 7758682 ~ 7758963 (-) True G148962
TU187485 lncRNA upstream 1284023 7955972 ~ 7956264 (-) True G149002
TU187523 lncRNA upstream 1631870 8303819 ~ 8304215 (-) True G149030
TU187566 lncRNA upstream 1857118 8529067 ~ 8583456 (-) True G149068
AMCG00000207 mRNA downstream 11011 6638579 ~ 6659202 (-) True AMCG00000207
AMCG00000205 mRNA downstream 45887 6599124 ~ 6624326 (-) True AMCG00000205
AMCG00000184 mRNA downstream 117883 6521027 ~ 6552330 (-) True AMCG00000184
AMCG00000182 mRNA downstream 189913 6475441 ~ 6480300 (-) True AMCG00000182
AMCG00000191 mRNA downstream 381867 6285009 ~ 6288346 (-) True AMCG00000191
AMCG00000210 mRNA upstream 187057 6859006 ~ 6861428 (-) True AMCG00000210
AMCG00000192 mRNA upstream 244725 6916674 ~ 6921676 (-) True AMCG00000192
AMCG00000194 mRNA upstream 251467 6923416 ~ 6927165 (-) True AMCG00000194
AMCG00000193 mRNA upstream 256048 6927997 ~ 6935187 (-) True AMCG00000193
AMCG00000230 mRNA upstream 540582 7212531 ~ 7225374 (-) True AMCG00000230
TU187117 other downstream 106908 6557842 ~ 6563305 (-) False G148692
TU187112 other downstream 106908 6558826 ~ 6563305 (-) False G148692
TU187026 other downstream 453772 6215756 ~ 6216441 (-) False AMCG00000190
TU187023 other downstream 460256 6209274 ~ 6209957 (-) False AMCG00000189
TU187005 other downstream 515947 6150720 ~ 6154266 (-) False AMCG00000168
TU187302 other upstream 689273 7361222 ~ 7362692 (-) True G148851
TU187495 other upstream 1424016 8095965 ~ 8106839 (-) True G149011
TU187735 other upstream 2363608 9035557 ~ 9045855 (-) False AMCG00000260
TU187888 other upstream 2815930 9487879 ~ 9488609 (-) True G149321
TU187910 other upstream 2868662 9540611 ~ 9541259 (-) True G149341

Expression Profile