RNA id: AMCG00000207


Basic Information

Item Value
RNA id AMCG00000207
length 1551
RNA type mRNA
GC content 0.52
exon number 9
gene id AMCG00000207
representative True

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 6638579 ~ 6659202 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTAGATTTCTCGCTCCAGATCTTCCAAGTCCGGGGAGAACATGCGCTGGCCGTGGCAAAACTGGAAGACGTCATTAAGAGGTTGAAAAACGACCTGCGCACCAACGCCTGCAGAGAGCGGGGCGAACTCAGGGAGGTCTGCGTGTCGACTGAGGACGACCTGCTCCCGAAGACCTTCCGCACCGTGTGCGTCCAGACGGACAGAGAGACCTTCATCAAGACACCCGAGGACGAGAACAGGACTATCCAAAACAACCAACATGTGCCTAAAAAACTGGACCTGGAGTCCATCAACCAGAACCTGAGGAAAACGGATCATGTTTCAGGACCgccgccacccccacccccacccccacccccacccctgccaGGCTCAATGGCCCCACCTCCTCTCCCCAATgctgcacccccaccccctccaccaccaccaccaccacctcccctCCCCGGTGCTggaccccctcctcctcctccacccctgCCAGGAGCTGGCCCTCCTCCGCCACCGCCACCGCCGATGCCAGGAGCCGGCCCCCCGCCTCCTCCGCCTTTCCCAGGAGGCTTTTCGATGCGAGTGATGGAGAAAGCCCCCCGGAAACCGGCAGTGGAGCCCACGTGCCCCATGAAGCCCCTGTACTGGACAAGAATTCAGATTCAAGAAAACAACAATAACACATTGTGGGGTTCGCTAGAAGAACCGAATATTTTGGATCCAACAGAGTTTGAAGATCTTTTCTCCAAAGCCACACTGCAGCCCAAGAAGAAACCACTGTCAGACACCTATGAAAAGAAGGCCAAGGCTAAAAAGctTATTAAGCTATTGGATGGGAAACGCTCTCAAGCTGTGGGGATCCTCATCTCGAGTCTACATCTGGAAATGAAAGACATTCAGCAAGCTGTTTTAACTGTGGACAACTCTGTTGTGGACTTGGAAACCATCGAGgctttatatgaaaatAGGGCTCAAAGTGAAGAactggagaaaataaagaaacactaTGAGACATCGAGAGAGGATGAAGTGAAGCTGCTAGACAAACCTGAACAGTTCTTGTATGAGCTGTCTCAGATCCCTGACTTTGCAGGACGTGCCCACTGCATTATATTCCAGTCTGTATTCCACGAGGGGATATCTTCAGTACGTCGCAAAATCGAGATTGTTTCAAGTGTTTCCAAGGGTTTGTTGGAACCAAGGAGTGTGAAAGACATTATGGGGTTGGTCTTGGCCTTTGGTAATTATATGAACGGTGGCAATCGAACACGAGGCCAGGCTGATGGCTTCGGGCTGGAGATTTTACCAAAGCTGAAAGATGTAAAGAGCAGGGATAACCGCATCAGTTTGGTGGATTATGTTGTCTCGTACTATCTGCGCTATATGGATGAGAACGCCGGGACGGACAAGAGCGTCTTTCCTCTGCCGGAGCCCCAGGACCTGTTTCTATCTACTCAAGTCAAGTTTGAGGATGTCACAAAAGACCTGAGGAAGCTGAAGAAAGATCTGACTGGTAATTGTGTTCTTCGCATTTTCCCTAAAAGCCCCTTCCTTCTCTGA

Function

GO: NA

KEGG:

id description
K10367 FMN1; formin 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU187110 lncRNA downstream 75274 6556705 ~ 6563305 (-) False G148692
TU187113 lncRNA downstream 75274 6557842 ~ 6563305 (-) True G148692
TU187002 lncRNA downstream 490293 6147929 ~ 6148286 (-) True G148610
TU186961 lncRNA downstream 625942 6004186 ~ 6012637 (-) False AMCG00000180
TU187241 lncRNA upstream 481160 7140362 ~ 7140968 (-) True G148801
TU187436 lncRNA upstream 1099480 7758682 ~ 7758963 (-) True G148962
TU187485 lncRNA upstream 1296770 7955972 ~ 7956264 (-) True G149002
TU187523 lncRNA upstream 1644617 8303819 ~ 8304215 (-) True G149030
TU187566 lncRNA upstream 1869865 8529067 ~ 8583456 (-) True G149068
AMCG00000205 mRNA downstream 14253 6599124 ~ 6624326 (-) True AMCG00000205
AMCG00000184 mRNA downstream 86249 6521027 ~ 6552330 (-) True AMCG00000184
AMCG00000182 mRNA downstream 158279 6475441 ~ 6480300 (-) True AMCG00000182
AMCG00000191 mRNA downstream 350233 6285009 ~ 6288346 (-) True AMCG00000191
AMCG00000187 mRNA downstream 359035 6260620 ~ 6279544 (-) True AMCG00000187
AMCG00000206 mRNA upstream 11011 6670213 ~ 6671949 (-) True AMCG00000206
AMCG00000210 mRNA upstream 199804 6859006 ~ 6861428 (-) True AMCG00000210
AMCG00000192 mRNA upstream 257472 6916674 ~ 6921676 (-) True AMCG00000192
AMCG00000194 mRNA upstream 264214 6923416 ~ 6927165 (-) True AMCG00000194
AMCG00000193 mRNA upstream 268795 6927997 ~ 6935187 (-) True AMCG00000193
TU187117 other downstream 75274 6557842 ~ 6563305 (-) False G148692
TU187112 other downstream 75274 6558826 ~ 6563305 (-) False G148692
TU187026 other downstream 422138 6215756 ~ 6216441 (-) False AMCG00000190
TU187023 other downstream 428622 6209274 ~ 6209957 (-) False AMCG00000189
TU187005 other downstream 484313 6150720 ~ 6154266 (-) False AMCG00000168
TU187302 other upstream 702020 7361222 ~ 7362692 (-) True G148851
TU187495 other upstream 1436763 8095965 ~ 8106839 (-) True G149011
TU187735 other upstream 2376355 9035557 ~ 9045855 (-) False AMCG00000260
TU187888 other upstream 2828677 9487879 ~ 9488609 (-) True G149321
TU187910 other upstream 2881409 9540611 ~ 9541259 (-) True G149341

Expression Profile