RNA id: AMCG00000254



Basic Information


Item Value
RNA id AMCG00000254
length 234
RNA type mRNA
GC content 0.49
exon number 2
gene id AMCG00000254
representative True

Chromosome Information


Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 8729285 ~ 8734548 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCACTGTAGAGATAAGACAGCTGCTCGCCCCGTGCCCAGCGCAGAGATGAGTGCCAAATCAGCCATCAACAAGGAGATTTTTGCACCGCATGATGAGAGGATGCTGGGAGCCGTTCAGGTCAAGAGAAGAACGAAGAAAAAGATCCCCTTCTTAGCCACTGGAGGCCAGGGAGACTATATGACTTTTATATGCTTGTCAGGTAATCTTCTGCCAGTTTTCCCTGATGATTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU187566 lncRNA downstream 145829 8529067 ~ 8583456 (-) True G149068
TU187573 lncRNA downstream 154199 8573082 ~ 8575086 (-) True G149075
TU187523 lncRNA downstream 425070 8303819 ~ 8304215 (-) True G149030
TU187485 lncRNA downstream 773021 7955972 ~ 7956264 (-) True G149002
TU187436 lncRNA downstream 970322 7758682 ~ 7758963 (-) True G148962
TU187585 lncRNA upstream 9323 8743871 ~ 8744499 (-) True G149087
TU187631 lncRNA upstream 116768 8851316 ~ 8851779 (-) True G149125
TU187643 lncRNA upstream 148100 8882648 ~ 8945588 (-) True G149132
TU187772 lncRNA upstream 435535 9170083 ~ 9188266 (-) True AMCG00000270
TU187809 lncRNA upstream 626784 9361332 ~ 9363435 (-) True G149268
AMCG00000253 mRNA downstream 42202 8668901 ~ 8687083 (-) True AMCG00000253
AMCG00000240 mRNA downstream 814853 7898317 ~ 7914432 (-) True AMCG00000240
AMCG00000239 mRNA downstream 837135 7886490 ~ 7892150 (-) True AMCG00000239
AMCG00000226 mRNA downstream 881941 7841415 ~ 7847344 (-) True AMCG00000226
AMCG00000224 mRNA downstream 961025 7760630 ~ 7768260 (-) True AMCG00000224
AMCG00000242 mRNA upstream 17129 8751677 ~ 8771216 (-) True AMCG00000242
AMCG00000243 mRNA upstream 53557 8788105 ~ 8814916 (-) True AMCG00000243
AMCG00000241 mRNA upstream 118671 8853219 ~ 8863951 (-) True AMCG00000241
AMCG00000257 mRNA upstream 212115 8946663 ~ 8961375 (-) True AMCG00000257
AMCG00000265 mRNA upstream 228420 8962968 ~ 8977588 (-) True AMCG00000265
TU187495 other downstream 622446 8095965 ~ 8106839 (-) True G149011
TU187302 other downstream 1366593 7361222 ~ 7362692 (-) True G148851
TU187117 other downstream 2165980 6557842 ~ 6563305 (-) False G148692
TU187112 other downstream 2165980 6558826 ~ 6563305 (-) False G148692
TU187026 other downstream 2512844 6215756 ~ 6216441 (-) False AMCG00000190
TU187735 other upstream 301009 9035557 ~ 9045855 (-) False AMCG00000260
TU187888 other upstream 753331 9487879 ~ 9488609 (-) True G149321
TU187910 other upstream 806063 9540611 ~ 9541259 (-) True G149341
TU187980 other upstream 1021833 9756381 ~ 9766794 (-) True G149395
TU188004 other upstream 1097207 9831755 ~ 9832133 (-) True G149402

Expression Profile