Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00000342 |
| length | 1128 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 1 |
| gene id | AMCG00000342 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 12143523 ~ 12144650 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0006935 | chemotaxis | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004950 | chemokine receptor activity | molecular_function |
| GO:0004983 | neuropeptide Y receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU188450 | lncRNA | downstream | 45032 | 12090647 ~ 12098491 (-) | True | G149756 |
| TU188441 | lncRNA | downstream | 53257 | 12090007 ~ 12090266 (-) | True | G149755 |
| TU188440 | lncRNA | downstream | 55553 | 12087596 ~ 12087970 (-) | True | G149754 |
| TU188415 | lncRNA | downstream | 144229 | 11997838 ~ 11999294 (-) | True | G149730 |
| TU188407 | lncRNA | downstream | 157004 | 11986192 ~ 11986519 (-) | True | G149723 |
| TU188461 | lncRNA | upstream | 13099 | 12157749 ~ 12158471 (-) | True | G149763 |
| TU188520 | lncRNA | upstream | 159350 | 12304000 ~ 12304343 (-) | True | G149801 |
| TU188521 | lncRNA | upstream | 200759 | 12345409 ~ 12345710 (-) | True | G149802 |
| TU188697 | lncRNA | upstream | 673130 | 12817780 ~ 12825281 (-) | True | G149942 |
| TU188768 | lncRNA | upstream | 797936 | 12942586 ~ 12946121 (-) | True | G149994 |
| AMCG00000356 | mRNA | downstream | 118027 | 12024594 ~ 12025496 (-) | True | AMCG00000356 |
| AMCG00000355 | mRNA | downstream | 124342 | 12005106 ~ 12019181 (-) | True | AMCG00000355 |
| AMCG00000354 | mRNA | downstream | 139223 | 12002254 ~ 12004300 (-) | True | AMCG00000354 |
| AMCG00000333 | mRNA | downstream | 279907 | 11854916 ~ 11863616 (-) | True | AMCG00000333 |
| AMCG00000336 | mRNA | downstream | 295575 | 11840480 ~ 11847948 (-) | True | AMCG00000336 |
| AMCG00000341 | mRNA | upstream | 14816 | 12159466 ~ 12161567 (-) | True | AMCG00000341 |
| AMCG00000343 | mRNA | upstream | 28985 | 12173635 ~ 12181462 (-) | True | AMCG00000343 |
| AMCG00000348 | mRNA | upstream | 221815 | 12366465 ~ 12379163 (-) | True | AMCG00000348 |
| AMCG00000360 | mRNA | upstream | 259954 | 12404604 ~ 12414806 (-) | True | AMCG00000360 |
| AMCG00000361 | mRNA | upstream | 278353 | 12423003 ~ 12428292 (-) | True | AMCG00000361 |
| TU188437 | other | downstream | 60309 | 12081543 ~ 12083214 (-) | True | G149751 |
| TU188051 | other | downstream | 2207973 | 9930970 ~ 9935550 (-) | True | G149441 |
| TU188004 | other | downstream | 2311390 | 9831755 ~ 9832133 (-) | True | G149402 |
| TU187980 | other | downstream | 2376729 | 9756381 ~ 9766794 (-) | True | G149395 |
| TU187910 | other | downstream | 2602264 | 9540611 ~ 9541259 (-) | True | G149341 |
| TU188588 | other | upstream | 377870 | 12522520 ~ 12542310 (-) | True | G149847 |
| TU188948 | other | upstream | 1679304 | 13823954 ~ 13826709 (-) | True | G150138 |
| TU189195 | other | upstream | 2425312 | 14569962 ~ 14572432 (-) | True | AMCG00000436 |
| TU189371 | other | upstream | 3068764 | 15213414 ~ 15222743 (-) | True | AMCG00000464 |
| TU189419 | other | upstream | 3144702 | 15289352 ~ 15291236 (-) | False | AMCG00000475 |
