RNA id: AMCG00000469


Basic Information

Item Value
RNA id AMCG00000469
length 282
RNA type mRNA
GC content 0.49
exon number 3
gene id AMCG00000469
representative False

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 15498172 ~ 15527390 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCCATGGACATGGACATGGGAGATGGCACAGACAAGTGTATAACAGTGAATATCCCTGTCATGGGAGGAGCCTTCATGGACTCACCCAATGATGATTACAGCGCAGATCACTCTTTGTTCAACTCCTCGGCAAGTGTCCACGCTGCTGCGATTACGGCCCAGAATCAACAGGAAGAGGCGCACTCAGTCTCCAGTGATGCAATCTGGCTTTGGATTGCCATTATTGCTACAATTGGAAATATTGTGGTTGTAGGGGTTGTCTATGCCTTCACCTTCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU189478 lncRNA downstream 33665 15461846 ~ 15467306 (-) False AMCG00000482
TU189421 lncRNA downstream 205766 15294219 ~ 15295205 (-) True G150514
TU189401 lncRNA downstream 222915 15275963 ~ 15278056 (-) True G150497
TU189409 lncRNA downstream 227848 15271396 ~ 15273123 (-) True G150504
TU189406 lncRNA downstream 237395 15261387 ~ 15263576 (-) True G150502
TU189508 lncRNA upstream 39745 15566759 ~ 15568750 (-) True G150581
TU189513 lncRNA upstream 51875 15578889 ~ 15580921 (-) True G150586
TU189515 lncRNA upstream 92207 15619221 ~ 15619788 (-) True G150588
TU189562 lncRNA upstream 229839 15756853 ~ 15758160 (-) True G150626
TU189570 lncRNA upstream 321021 15848035 ~ 15871468 (-) True G150634
AMCG00000482 mRNA downstream 21922 15465324 ~ 15479049 (-) True AMCG00000482
AMCG00000481 mRNA downstream 81401 15415530 ~ 15419570 (-) True AMCG00000481
AMCG00000479 mRNA downstream 89697 15391869 ~ 15411274 (-) True AMCG00000479
AMCG00000480 mRNA downstream 110021 15383657 ~ 15390950 (-) True AMCG00000480
AMCG00000477 mRNA downstream 180756 15311001 ~ 15320215 (-) True AMCG00000477
AMCG00000472 mRNA upstream 89949 15616963 ~ 15619029 (-) True AMCG00000472
AMCG00000494 mRNA upstream 726123 16253137 ~ 16266313 (-) True AMCG00000494
AMCG00000493 mRNA upstream 749984 16276998 ~ 16278955 (-) True AMCG00000493
AMCG00000487 mRNA upstream 1123057 16650071 ~ 16659677 (-) True AMCG00000487
AMCG00000488 mRNA upstream 1160091 16687105 ~ 16689646 (-) True AMCG00000488
TU189419 other downstream 209735 15289352 ~ 15291236 (-) False AMCG00000475
TU189371 other downstream 278228 15213414 ~ 15222743 (-) True AMCG00000464
TU189195 other downstream 928539 14569962 ~ 14572432 (-) True AMCG00000436
TU188948 other downstream 1674262 13823954 ~ 13826709 (-) True G150138
TU188588 other downstream 2958661 12522520 ~ 12542310 (-) True G149847
TU189692 other upstream 1281078 16808092 ~ 16834326 (-) True G150729
TU189969 other upstream 2480082 18007096 ~ 18009850 (-) False AMCG00000539
TU190177 other upstream 2884474 18411488 ~ 18412525 (-) True G151087
TU190178 other upstream 2885826 18412840 ~ 18413465 (-) True G151088
TU190179 other upstream 2887041 18414055 ~ 18414558 (-) True G151089

Expression Profile