Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00000472 |
| length | 1134 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 2 |
| gene id | AMCG00000472 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 15616963 ~ 15619029 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0030097 | hemopoiesis | biological_process |
| GO:0045454 | cell redox homeostasis | biological_process |
| GO:0016226 | iron-sulfur cluster assembly | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0009055 | electron transfer activity | molecular_function |
| GO:0051537 | 2 iron, 2 sulfur cluster binding | molecular_function |
| GO:0015035 | protein disulfide oxidoreductase activity | molecular_function |
| id | description |
|---|---|
| K07390 | grxD, GLRX5; monothiol glutaredoxin |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU189513 | lncRNA | downstream | 36042 | 15578889 ~ 15580921 (-) | True | G150586 |
| TU189508 | lncRNA | downstream | 48213 | 15566759 ~ 15568750 (-) | True | G150581 |
| TU189486 | lncRNA | downstream | 89573 | 15498172 ~ 15527390 (-) | True | AMCG00000469 |
| TU189478 | lncRNA | downstream | 149657 | 15461846 ~ 15467306 (-) | False | AMCG00000482 |
| TU189421 | lncRNA | downstream | 321758 | 15294219 ~ 15295205 (-) | True | G150514 |
| TU189515 | lncRNA | upstream | 192 | 15619221 ~ 15619788 (-) | True | G150588 |
| TU189562 | lncRNA | upstream | 137824 | 15756853 ~ 15758160 (-) | True | G150626 |
| TU189570 | lncRNA | upstream | 229006 | 15848035 ~ 15871468 (-) | True | G150634 |
| TU189602 | lncRNA | upstream | 613929 | 16232958 ~ 16233189 (-) | True | G150661 |
| TU189689 | lncRNA | upstream | 1186166 | 16805195 ~ 16829740 (-) | False | G150729 |
| AMCG00000469 | mRNA | downstream | 89949 | 15500971 ~ 15527014 (-) | False | AMCG00000469 |
| AMCG00000482 | mRNA | downstream | 137914 | 15465324 ~ 15479049 (-) | True | AMCG00000482 |
| AMCG00000481 | mRNA | downstream | 197393 | 15415530 ~ 15419570 (-) | True | AMCG00000481 |
| AMCG00000479 | mRNA | downstream | 205689 | 15391869 ~ 15411274 (-) | True | AMCG00000479 |
| AMCG00000480 | mRNA | downstream | 226013 | 15383657 ~ 15390950 (-) | True | AMCG00000480 |
| AMCG00000494 | mRNA | upstream | 634108 | 16253137 ~ 16266313 (-) | True | AMCG00000494 |
| AMCG00000493 | mRNA | upstream | 657969 | 16276998 ~ 16278955 (-) | True | AMCG00000493 |
| AMCG00000487 | mRNA | upstream | 1031042 | 16650071 ~ 16659677 (-) | True | AMCG00000487 |
| AMCG00000488 | mRNA | upstream | 1068076 | 16687105 ~ 16689646 (-) | True | AMCG00000488 |
| AMCG00000496 | mRNA | upstream | 1103145 | 16722174 ~ 16736751 (-) | True | AMCG00000496 |
| TU189419 | other | downstream | 325727 | 15289352 ~ 15291236 (-) | False | AMCG00000475 |
| TU189371 | other | downstream | 394220 | 15213414 ~ 15222743 (-) | True | AMCG00000464 |
| TU189195 | other | downstream | 1044531 | 14569962 ~ 14572432 (-) | True | AMCG00000436 |
| TU188948 | other | downstream | 1790254 | 13823954 ~ 13826709 (-) | True | G150138 |
| TU188588 | other | downstream | 3074653 | 12522520 ~ 12542310 (-) | True | G149847 |
| TU189692 | other | upstream | 1189063 | 16808092 ~ 16834326 (-) | True | G150729 |
| TU189969 | other | upstream | 2388067 | 18007096 ~ 18009850 (-) | False | AMCG00000539 |
| TU190177 | other | upstream | 2792459 | 18411488 ~ 18412525 (-) | True | G151087 |
| TU190178 | other | upstream | 2793811 | 18412840 ~ 18413465 (-) | True | G151088 |
| TU190179 | other | upstream | 2795026 | 18414055 ~ 18414558 (-) | True | G151089 |
