RNA id: AMCG00000640


Basic Information

Item Value
RNA id AMCG00000640
length 276
RNA type mRNA
GC content 0.52
exon number 2
gene id AMCG00000640
representative True

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 21089597 ~ 21091487 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCGGCAGCTCCAATCCAGCAGAACGGGACTCACACCGGGGTGCCCATAGACCTAGACCCGCCGGATTCCCGGAAAAGACCGCTAGAAGCCCCTCCGGAGGCGGGCAGCACCAAGAGAACCAACACGGGCGaAGACGGTCAATTTTTCTTAAAAGTCCTAATACCGAGTTATGCTGCTGGATCTATAATTGGGAAAGGAGGACAGACAATTGTCCAGCTTCAAAAAGAGACCGGCGCTACCATCAAACTGTCTAAATCCAAAGACTTTTACCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU191045 lncRNA downstream 109252 20980073 ~ 20980345 (-) True G151739
TU191029 lncRNA downstream 172512 20916230 ~ 20917085 (-) True G151727
TU191028 lncRNA downstream 173380 20915241 ~ 20916217 (-) True G151726
TU191027 lncRNA downstream 174917 20914441 ~ 20914680 (-) True G151725
TU190976 lncRNA downstream 277343 20811540 ~ 20812254 (-) True G151678
AMCG00000639 mRNA downstream 44124 21041209 ~ 21045473 (-) True AMCG00000639
AMCG00000638 mRNA downstream 59250 21029412 ~ 21030347 (-) True AMCG00000638
AMCG00000651 mRNA downstream 151033 20935538 ~ 20938564 (-) True AMCG00000651
AMCG00000653 mRNA downstream 158083 20926691 ~ 20931514 (-) False AMCG00000653
AMCG00000652 mRNA downstream 169133 20917662 ~ 20920464 (-) True AMCG00000652
AMCG00000655 mRNA upstream 261394 21352881 ~ 21374399 (-) True AMCG00000655
AMCG00000656 mRNA upstream 289207 21380694 ~ 21383654 (-) True AMCG00000656
AMCG00000675 mRNA upstream 437681 21529168 ~ 21547638 (-) True AMCG00000675
AMCG00000676 mRNA upstream 456450 21547937 ~ 21559384 (-) True AMCG00000676
AMCG00000673 mRNA upstream 474701 21566188 ~ 21594565 (-) True AMCG00000673
TU191039 other downstream 154168 20926749 ~ 20935429 (-) True AMCG00000653
TU190947 other downstream 342276 20746671 ~ 20747321 (-) False AMCG00000635
TU190879 other downstream 454651 20632089 ~ 20634946 (-) True G151593
TU190711 other downstream 1443122 19643950 ~ 19646475 (-) False AMCG00000618
TU190562 other downstream 1752865 19333977 ~ 19336732 (-) False AMCG00000599
TU191083 other upstream 346780 21438267 ~ 21457795 (-) True G151771

Expression Profile