RNA id: TU186147



Basic Information


Item Value
RNA id TU186147
length 330
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G147941
representative True

Chromosome Information


Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 3463303 ~ 3463632 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ttggagttttcattctaCGTTcatcctgtgtttttttcttctgccgtttttgtatatttaacacCAAGAAGTTGTTTTCTATTCTTCTCCCCCCAGATTAATCATGTTATCCGttatctctcactctctctctttctgtggttgtttgtatttgctgattaaattgatgttgaaggaaTGTTGACAATTCGACATTGATTCCGTTTGCAAATGCAACCAATTTGCAACtaaatttcaatgttgtatacattagattacattagaaacaacacGTCATATTTCAACCttgaataaacattgaaaattgattggatttgcaaatggaatcga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU186125 lncRNA downstream 154502 3307169 ~ 3308801 (-) True G147921
TU185988 lncRNA downstream 448720 3010249 ~ 3014583 (-) True G147823
TU185941 lncRNA downstream 669974 2790287 ~ 2793329 (-) True G147782
TU185877 lncRNA downstream 1059685 2403398 ~ 2403618 (-) True G147725
TU185874 lncRNA downstream 1080089 2383014 ~ 2383214 (-) True G147722
TU186193 lncRNA upstream 88527 3552159 ~ 3557837 (-) True AMCG00000084
TU186213 lncRNA upstream 178733 3642365 ~ 3642669 (-) True G147997
TU186232 lncRNA upstream 224331 3687963 ~ 3688231 (-) True G148011
TU186263 lncRNA upstream 296670 3760302 ~ 3760617 (-) True G148041
TU186436 lncRNA upstream 767010 4230642 ~ 4231328 (-) True G148181
AMCG00000080 mRNA downstream 63650 3388190 ~ 3399653 (-) True AMCG00000080
AMCG00000076 mRNA downstream 135663 3308930 ~ 3327640 (-) True AMCG00000076
AMCG00000077 mRNA downstream 158043 3291179 ~ 3305260 (-) True AMCG00000077
AMCG00000097 mRNA downstream 175496 3268369 ~ 3287807 (-) True AMCG00000097
AMCG00000101 mRNA downstream 207714 3238847 ~ 3255589 (-) True AMCG00000101
AMCG00000084 mRNA upstream 91064 3554696 ~ 3558901 (-) False AMCG00000084
AMCG00000091 mRNA upstream 244751 3708383 ~ 3708970 (-) True AMCG00000091
AMCG00000092 mRNA upstream 262705 3726337 ~ 3735602 (-) True AMCG00000092
AMCG00000105 mRNA upstream 317351 3780983 ~ 3804361 (-) True AMCG00000105
AMCG00000107 mRNA upstream 412732 3876364 ~ 3897220 (-) True AMCG00000107
TU185384 other downstream 2977720 484720 ~ 485583 (-) True G147324
TU185352 other downstream 3070821 387118 ~ 392482 (-) True AMCG00000037
TU185350 other downstream 3071168 387118 ~ 392135 (-) False AMCG00000037
TU186746 other upstream 1875177 5338809 ~ 5342491 (-) True G148395
TU186991 other upstream 2597690 6061322 ~ 6067184 (-) False AMCG00000177
TU187005 other upstream 2687088 6150720 ~ 6154266 (-) False AMCG00000168
TU187023 other upstream 2745642 6209274 ~ 6209957 (-) False AMCG00000189
TU187026 other upstream 2752124 6215756 ~ 6216441 (-) False AMCG00000190

Expression Profile