RNA id: TU186213



Basic Information


Item Value
RNA id TU186213
length 305
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G147997
representative True

Chromosome Information


Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 3642365 ~ 3642669 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCTAAATGTGTGTTCTGCACATGACCAAGTGGCCactgaatgtttatttatgcTGTTGCATCAGCTGTGTGTCTCTTGAGATGTGTAGGTGACTCTCCTTCTCGTCCCCAGGATGCTAAGAGGGTTTTGAAGAAGGCCCCTGAAGATGAGTGTGACGTCATGGTTCCTGGTCAGCAGCTCGGGCATTCGCCACCGGCTCCCACGAGAGATGATCTTTGTGGGCCGGGAGGACTGTGAACTCATGCTGCAGGTCAGTGGCCAGAGTGTGTCCCTCACATGAGCAGACAACGCTTTGGAGGTACAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU186193 lncRNA downstream 84528 3552159 ~ 3557837 (-) True AMCG00000084
TU186147 lncRNA downstream 178733 3463303 ~ 3463632 (-) True G147941
TU186125 lncRNA downstream 333564 3307169 ~ 3308801 (-) True G147921
TU185988 lncRNA downstream 627782 3010249 ~ 3014583 (-) True G147823
TU185941 lncRNA downstream 849036 2790287 ~ 2793329 (-) True G147782
TU186232 lncRNA upstream 45294 3687963 ~ 3688231 (-) True G148011
TU186263 lncRNA upstream 117633 3760302 ~ 3760617 (-) True G148041
TU186436 lncRNA upstream 587973 4230642 ~ 4231328 (-) True G148181
TU186460 lncRNA upstream 905155 4547824 ~ 4548060 (-) True G148198
TU186647 lncRNA upstream 1431761 5074430 ~ 5077246 (-) True AMCG00000161
AMCG00000084 mRNA downstream 83464 3554696 ~ 3558901 (-) False AMCG00000084
AMCG00000080 mRNA downstream 242712 3388190 ~ 3399653 (-) True AMCG00000080
AMCG00000076 mRNA downstream 314725 3308930 ~ 3327640 (-) True AMCG00000076
AMCG00000077 mRNA downstream 337105 3291179 ~ 3305260 (-) True AMCG00000077
AMCG00000097 mRNA downstream 354558 3268369 ~ 3287807 (-) True AMCG00000097
AMCG00000091 mRNA upstream 65714 3708383 ~ 3708970 (-) True AMCG00000091
AMCG00000092 mRNA upstream 83668 3726337 ~ 3735602 (-) True AMCG00000092
AMCG00000105 mRNA upstream 138314 3780983 ~ 3804361 (-) True AMCG00000105
AMCG00000107 mRNA upstream 233695 3876364 ~ 3897220 (-) True AMCG00000107
AMCG00000106 mRNA upstream 277926 3920595 ~ 3928012 (-) True AMCG00000106
TU185384 other downstream 3156782 484720 ~ 485583 (-) True G147324
TU185352 other downstream 3249883 387118 ~ 392482 (-) True AMCG00000037
TU185350 other downstream 3250230 387118 ~ 392135 (-) False AMCG00000037
TU186746 other upstream 1696140 5338809 ~ 5342491 (-) True G148395
TU186991 other upstream 2418653 6061322 ~ 6067184 (-) False AMCG00000177
TU187005 other upstream 2508051 6150720 ~ 6154266 (-) False AMCG00000168
TU187023 other upstream 2566605 6209274 ~ 6209957 (-) False AMCG00000189
TU187026 other upstream 2573087 6215756 ~ 6216441 (-) False AMCG00000190

Expression Profile