RNA id: TU186776


Basic Information

Item Value
RNA id TU186776
length 244
lncRNA type inter_gene
GC content 0.27
exon number 1
gene id G148417
representative True

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 5455246 ~ 5455489 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cgtttatatatatgtatatatatatatatatatatatatatatatatatatatacagtgagggaaaaaagtatttgatcccctgctgattttgtacgtttgcccactgacaaagaaatgatcagtctataattttaatggtaggtgtattttaacagtgagagacagaatcacaacaaaaaagtccagaaaaaaacgcatttcaaaaaagttataaattgatttgcatgttaaagagGGAAATA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU186775 lncRNA downstream 998 5451000 ~ 5454248 (-) True G148416
TU186757 lncRNA downstream 75118 5377749 ~ 5380128 (-) True G148400
TU186748 lncRNA downstream 112755 5340755 ~ 5342491 (-) False G148395
TU186704 lncRNA downstream 214563 5236868 ~ 5240683 (-) True G148364
TU186647 lncRNA downstream 378000 5074430 ~ 5077246 (-) True AMCG00000161
TU186854 lncRNA upstream 255530 5711019 ~ 5711876 (-) True G148486
TU186961 lncRNA upstream 548697 6004186 ~ 6012637 (-) False AMCG00000180
TU186962 lncRNA upstream 548697 6004186 ~ 6012637 (-) True AMCG00000180
TU187002 lncRNA upstream 692440 6147929 ~ 6148286 (-) True G148610
TU187110 lncRNA upstream 1101216 6556705 ~ 6563305 (-) False G148692
AMCG00000144 mRNA downstream 48005 5398387 ~ 5407241 (-) True AMCG00000144
AMCG00000151 mRNA downstream 135717 5312483 ~ 5319529 (-) True AMCG00000151
AMCG00000149 mRNA downstream 149166 5293188 ~ 5306080 (-) True AMCG00000149
AMCG00000150 mRNA downstream 169814 5274675 ~ 5285432 (-) True AMCG00000150
AMCG00000140 mRNA downstream 198858 5243028 ~ 5256388 (-) True AMCG00000140
AMCG00000158 mRNA upstream 16672 5472161 ~ 5516402 (-) True AMCG00000158
AMCG00000156 mRNA upstream 65966 5521455 ~ 5528826 (-) True AMCG00000156
AMCG00000157 mRNA upstream 89340 5544829 ~ 5573070 (-) True AMCG00000157
AMCG00000154 mRNA upstream 130458 5585947 ~ 5620822 (-) True AMCG00000154
AMCG00000153 mRNA upstream 202694 5658183 ~ 5659955 (-) True AMCG00000153
TU186746 other downstream 112755 5338809 ~ 5342491 (-) True G148395
TU185384 other downstream 4969663 484720 ~ 485583 (-) True G147324
TU185352 other downstream 5062764 387118 ~ 392482 (-) True AMCG00000037
TU185350 other downstream 5063111 387118 ~ 392135 (-) False AMCG00000037
TU186991 other upstream 605833 6061322 ~ 6067184 (-) False AMCG00000177
TU187005 other upstream 695231 6150720 ~ 6154266 (-) False AMCG00000168
TU187023 other upstream 753785 6209274 ~ 6209957 (-) False AMCG00000189
TU187026 other upstream 760267 6215756 ~ 6216441 (-) False AMCG00000190
TU187117 other upstream 1102353 6557842 ~ 6563305 (-) False G148692

Expression Profile