RNA id: TU187436



Basic Information


Item Value
RNA id TU187436
length 282
lncRNA type inter_gene
GC content 0.28
exon number 1
gene id G148962
representative True

Chromosome Information


Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 7758682 ~ 7758963 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCTATCAATTAAgactaaatataatataatataatataatataatgtgtatatatatatatatatatatatacacacacacacacacacacacacacaacaggaaCATTCATGGCTGCACTTAATGTTTGTTTCTGATATCGTTTGAAATTATTCCACAGCACCTctggacagaaaacaaactcCATCAGTTATTGCTTTTTTAAGTTTACATGATTGTACTTTTGGGGGAAAACTttagaagtatttatttattttacttaaccCAATTGCAAAATAACTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU187241 lncRNA downstream 617714 7140362 ~ 7140968 (-) True G148801
TU187110 lncRNA downstream 1195377 6556705 ~ 6563305 (-) False G148692
TU187113 lncRNA downstream 1195377 6557842 ~ 6563305 (-) True G148692
TU187002 lncRNA downstream 1610396 6147929 ~ 6148286 (-) True G148610
TU186961 lncRNA downstream 1746045 6004186 ~ 6012637 (-) False AMCG00000180
TU187485 lncRNA upstream 197009 7955972 ~ 7956264 (-) True G149002
TU187523 lncRNA upstream 544856 8303819 ~ 8304215 (-) True G149030
TU187566 lncRNA upstream 770104 8529067 ~ 8583456 (-) True G149068
TU187573 lncRNA upstream 814119 8573082 ~ 8575086 (-) True G149075
TU187575 lncRNA upstream 910053 8669016 ~ 8739984 (-) True G149077
AMCG00000225 mRNA downstream 5116 7746823 ~ 7753566 (-) True AMCG00000225
AMCG00000223 mRNA downstream 12014 7744581 ~ 7746668 (-) True AMCG00000223
AMCG00000222 mRNA downstream 68726 7685941 ~ 7689956 (-) True AMCG00000222
AMCG00000237 mRNA downstream 95687 7653443 ~ 7662995 (-) True AMCG00000237
AMCG00000236 mRNA downstream 139485 7594259 ~ 7619197 (-) True AMCG00000236
AMCG00000224 mRNA upstream 1667 7760630 ~ 7768260 (-) True AMCG00000224
AMCG00000226 mRNA upstream 82452 7841415 ~ 7847344 (-) True AMCG00000226
AMCG00000239 mRNA upstream 127527 7886490 ~ 7892150 (-) True AMCG00000239
AMCG00000240 mRNA upstream 139354 7898317 ~ 7914432 (-) True AMCG00000240
AMCG00000253 mRNA upstream 909938 8668901 ~ 8687083 (-) True AMCG00000253
TU187302 other downstream 395990 7361222 ~ 7362692 (-) True G148851
TU187117 other downstream 1195377 6557842 ~ 6563305 (-) False G148692
TU187112 other downstream 1195377 6558826 ~ 6563305 (-) False G148692
TU187026 other downstream 1542241 6215756 ~ 6216441 (-) False AMCG00000190
TU187023 other downstream 1548725 6209274 ~ 6209957 (-) False AMCG00000189
TU187495 other upstream 337002 8095965 ~ 8106839 (-) True G149011
TU187735 other upstream 1276594 9035557 ~ 9045855 (-) False AMCG00000260
TU187888 other upstream 1728916 9487879 ~ 9488609 (-) True G149321
TU187910 other upstream 1781648 9540611 ~ 9541259 (-) True G149341
TU187980 other upstream 1997418 9756381 ~ 9766794 (-) True G149395

Expression Profile