RNA id: TU187566



Basic Information


Item Value
RNA id TU187566
length 385
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G149068
representative True

Chromosome Information


Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 8529067 ~ 8583456 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATTTAATGTGACCAGTTCAATGGTATCTACATCATAATTGTGAGTTAACACCAGTCCTCAGGGATTGAACATGAGATGAAAAGACAAAGTCCTGggtcttgtttatttataaaccaataaatatcTCATCCAAATATAAATTGCACTTGTGTGTAAACAAACTGTACATTGAGGGGAAAGTCAGGAAGGGTGGCCTGGTTCTTCCAGGAGTCCAAACTCTGGCGTCCAATAGGCGGAGGTGAATTGGGATAGGGCGTTTAGAAGCATTTGCGGTGGACAATGGAGGGTCCTGCTTCATCGTACTCCTGCTTGCTGATCCACATCTGCTGGAAGGTGGACAGGGAGGCCAGGATGGAGCCGCCGATCCAGACAGAcaCTCAACTGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU187523 lncRNA downstream 224852 8303819 ~ 8304215 (-) True G149030
TU187485 lncRNA downstream 572803 7955972 ~ 7956264 (-) True G149002
TU187436 lncRNA downstream 770104 7758682 ~ 7758963 (-) True G148962
TU187241 lncRNA downstream 1388099 7140362 ~ 7140968 (-) True G148801
TU187110 lncRNA downstream 1965762 6556705 ~ 6563305 (-) False G148692
TU187575 lncRNA upstream 85560 8669016 ~ 8739984 (-) True G149077
TU187585 lncRNA upstream 160415 8743871 ~ 8744499 (-) True G149087
TU187631 lncRNA upstream 267860 8851316 ~ 8851779 (-) True G149125
TU187643 lncRNA upstream 299192 8882648 ~ 8945588 (-) True G149132
TU187772 lncRNA upstream 586627 9170083 ~ 9188266 (-) True AMCG00000270
AMCG00000240 mRNA downstream 614635 7898317 ~ 7914432 (-) True AMCG00000240
AMCG00000239 mRNA downstream 636917 7886490 ~ 7892150 (-) True AMCG00000239
AMCG00000226 mRNA downstream 681723 7841415 ~ 7847344 (-) True AMCG00000226
AMCG00000224 mRNA downstream 760807 7760630 ~ 7768260 (-) True AMCG00000224
AMCG00000225 mRNA downstream 775501 7746823 ~ 7753566 (-) True AMCG00000225
AMCG00000253 mRNA upstream 85445 8668901 ~ 8687083 (-) True AMCG00000253
AMCG00000254 mRNA upstream 145829 8729285 ~ 8734548 (-) True AMCG00000254
AMCG00000242 mRNA upstream 168221 8751677 ~ 8771216 (-) True AMCG00000242
AMCG00000243 mRNA upstream 204649 8788105 ~ 8814916 (-) True AMCG00000243
AMCG00000241 mRNA upstream 269763 8853219 ~ 8863951 (-) True AMCG00000241
TU187495 other downstream 422228 8095965 ~ 8106839 (-) True G149011
TU187302 other downstream 1166375 7361222 ~ 7362692 (-) True G148851
TU187117 other downstream 1965762 6557842 ~ 6563305 (-) False G148692
TU187112 other downstream 1965762 6558826 ~ 6563305 (-) False G148692
TU187026 other downstream 2312626 6215756 ~ 6216441 (-) False AMCG00000190
TU187735 other upstream 452101 9035557 ~ 9045855 (-) False AMCG00000260
TU187888 other upstream 904423 9487879 ~ 9488609 (-) True G149321
TU187910 other upstream 957155 9540611 ~ 9541259 (-) True G149341
TU187980 other upstream 1172925 9756381 ~ 9766794 (-) True G149395
TU188004 other upstream 1248299 9831755 ~ 9832133 (-) True G149402

Expression Profile