RNA id: TU187907



Basic Information


Item Value
RNA id TU187907
length 206
lncRNA type inter_gene
GC content 0.60
exon number 1
gene id G149338
representative True

Chromosome Information


Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 9534714 ~ 9534919 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TGTGGAGTGAAGAGCTTCGGATTGGACAGGAAGGCGTCGCGGAACACCTTGATGATGAGGTCGAGCTCCCGCAGGTACTGCCGCTCCTCCGCTATCTCCAGCCGCACCAGGTCATCGTAGGTCAGCTCGCCGGTGGACGAGGGCTCGTCACCACACTGAGACACCAGCCCAATGTCCTCGTCCTGGTCAAACATGTCCATCAGCAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU187901 lncRNA downstream 23364 9510125 ~ 9511350 (-) True G149332
TU187893 lncRNA downstream 37500 9496847 ~ 9497214 (-) True G149326
TU187892 lncRNA downstream 38129 9496233 ~ 9496585 (-) True G149325
TU187891 lncRNA downstream 38582 9494159 ~ 9496132 (-) True G149324
TU187889 lncRNA downstream 43908 9490269 ~ 9490806 (-) True G149322
TU187908 lncRNA upstream 1393 9536312 ~ 9536536 (-) True G149339
TU187909 lncRNA upstream 1910 9536829 ~ 9537094 (-) True G149340
TU187912 lncRNA upstream 7593 9542512 ~ 9542776 (-) True G149343
TU187913 lncRNA upstream 8668 9543587 ~ 9544030 (-) True G149344
TU187915 lncRNA upstream 9748 9544667 ~ 9544914 (-) True G149346
AMCG00000289 mRNA downstream 33564 9498720 ~ 9501150 (-) True AMCG00000289
AMCG00000279 mRNA downstream 95378 9427499 ~ 9439336 (-) True AMCG00000279
AMCG00000276 mRNA downstream 163935 9364170 ~ 9370779 (-) True AMCG00000276
AMCG00000275 mRNA downstream 245502 9284358 ~ 9289212 (-) True AMCG00000275
AMCG00000272 mRNA downstream 324063 9194617 ~ 9210651 (-) True AMCG00000272
AMCG00000290 mRNA upstream 17323 9552242 ~ 9553191 (-) True AMCG00000290
AMCG00000291 mRNA upstream 28476 9563395 ~ 9570360 (-) True AMCG00000291
AMCG00000284 mRNA upstream 228696 9763615 ~ 9765768 (-) True AMCG00000284
AMCG00000309 mRNA upstream 386400 9921319 ~ 9925304 (-) True AMCG00000309
AMCG00000312 mRNA upstream 407506 9942425 ~ 9955020 (-) True AMCG00000312
TU187888 other downstream 46105 9487879 ~ 9488609 (-) True G149321
TU187735 other downstream 488859 9035557 ~ 9045855 (-) False AMCG00000260
TU187495 other downstream 1427875 8095965 ~ 8106839 (-) True G149011
TU187302 other downstream 2172022 7361222 ~ 7362692 (-) True G148851
TU187112 other downstream 2971409 6558826 ~ 6563305 (-) False G148692
TU187910 other upstream 5692 9540611 ~ 9541259 (-) True G149341
TU187980 other upstream 221462 9756381 ~ 9766794 (-) True G149395
TU188004 other upstream 296836 9831755 ~ 9832133 (-) True G149402
TU188051 other upstream 396051 9930970 ~ 9935550 (-) True G149441
TU188437 other upstream 2546624 12081543 ~ 12083214 (-) True G149751

Expression Profile