RNA id: TU187908



Basic Information


Item Value
RNA id TU187908
length 225
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G149339
representative True

Chromosome Information


Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 9536312 ~ 9536536 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aaaacaaaagaaaacacagaaaaaagcaGTACAGTTATTTGTGGTGGCCTCCTGTCTCAAGGAAGCAGGTGACAGCAGTACCTCAGCCAGGTCCTCGAAGCAGCTGCCCACCAGAGGGTGAGGACTGCCGTCCGCGGTCATCTCCACTGCGTCCTCGATCAGCCCCAGCAGCTTCACGGTCAGCTCGTGGATGTCCAGGATGTTGCTAAAGATCACTTCGATATC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU187907 lncRNA downstream 1393 9534714 ~ 9534919 (-) True G149338
TU187901 lncRNA downstream 24962 9510125 ~ 9511350 (-) True G149332
TU187893 lncRNA downstream 39098 9496847 ~ 9497214 (-) True G149326
TU187892 lncRNA downstream 39727 9496233 ~ 9496585 (-) True G149325
TU187891 lncRNA downstream 40180 9494159 ~ 9496132 (-) True G149324
TU187909 lncRNA upstream 293 9536829 ~ 9537094 (-) True G149340
TU187912 lncRNA upstream 5976 9542512 ~ 9542776 (-) True G149343
TU187913 lncRNA upstream 7051 9543587 ~ 9544030 (-) True G149344
TU187915 lncRNA upstream 8131 9544667 ~ 9544914 (-) True G149346
TU187947 lncRNA upstream 35598 9572134 ~ 9574131 (-) True G149367
AMCG00000289 mRNA downstream 35162 9498720 ~ 9501150 (-) True AMCG00000289
AMCG00000279 mRNA downstream 96976 9427499 ~ 9439336 (-) True AMCG00000279
AMCG00000276 mRNA downstream 165533 9364170 ~ 9370779 (-) True AMCG00000276
AMCG00000275 mRNA downstream 247100 9284358 ~ 9289212 (-) True AMCG00000275
AMCG00000272 mRNA downstream 325661 9194617 ~ 9210651 (-) True AMCG00000272
AMCG00000290 mRNA upstream 15706 9552242 ~ 9553191 (-) True AMCG00000290
AMCG00000291 mRNA upstream 26859 9563395 ~ 9570360 (-) True AMCG00000291
AMCG00000284 mRNA upstream 227079 9763615 ~ 9765768 (-) True AMCG00000284
AMCG00000309 mRNA upstream 384783 9921319 ~ 9925304 (-) True AMCG00000309
AMCG00000312 mRNA upstream 405889 9942425 ~ 9955020 (-) True AMCG00000312
TU187888 other downstream 47703 9487879 ~ 9488609 (-) True G149321
TU187735 other downstream 490457 9035557 ~ 9045855 (-) False AMCG00000260
TU187495 other downstream 1429473 8095965 ~ 8106839 (-) True G149011
TU187302 other downstream 2173620 7361222 ~ 7362692 (-) True G148851
TU187112 other downstream 2973007 6558826 ~ 6563305 (-) False G148692
TU187910 other upstream 4075 9540611 ~ 9541259 (-) True G149341
TU187980 other upstream 219845 9756381 ~ 9766794 (-) True G149395
TU188004 other upstream 295219 9831755 ~ 9832133 (-) True G149402
TU188051 other upstream 394434 9930970 ~ 9935550 (-) True G149441
TU188437 other upstream 2545007 12081543 ~ 12083214 (-) True G149751

Expression Profile