RNA id: TU187912


Basic Information

Item Value
RNA id TU187912
length 265
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G149343
representative True

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 9542512 ~ 9542776 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cacAAACTGGCAAATCTTTCAGGACTCTCTGGAAAGGCTCACCTGTAGAGTTCGGACTCCAGCAATGTGAGCTGGCGTGCAATCTCAATGGGGTGAAGGGTCATGAGGTCAAAGGTCTCGATCTGGCCTGCCCTGCTGATGTGCCATTCGATGGGAGGGGGCGGGATGGGGAAGGTGATGCTGTGAATGACTCCATTGGACTGGGTCTGCATCTTCCGCTTGATGATTTTACTGATGGATTCCACCCACTTCCTCATGGACTTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU187909 lncRNA downstream 5418 9536829 ~ 9537094 (-) True G149340
TU187908 lncRNA downstream 5976 9536312 ~ 9536536 (-) True G149339
TU187907 lncRNA downstream 7593 9534714 ~ 9534919 (-) True G149338
TU187901 lncRNA downstream 31162 9510125 ~ 9511350 (-) True G149332
TU187893 lncRNA downstream 45298 9496847 ~ 9497214 (-) True G149326
TU187913 lncRNA upstream 811 9543587 ~ 9544030 (-) True G149344
TU187915 lncRNA upstream 1891 9544667 ~ 9544914 (-) True G149346
TU187947 lncRNA upstream 29358 9572134 ~ 9574131 (-) True G149367
TU187976 lncRNA upstream 201988 9744764 ~ 9747106 (-) True G149391
TU188016 lncRNA upstream 351770 9894546 ~ 9897750 (-) True G149414
AMCG00000289 mRNA downstream 41362 9498720 ~ 9501150 (-) True AMCG00000289
AMCG00000279 mRNA downstream 103176 9427499 ~ 9439336 (-) True AMCG00000279
AMCG00000276 mRNA downstream 171733 9364170 ~ 9370779 (-) True AMCG00000276
AMCG00000275 mRNA downstream 253300 9284358 ~ 9289212 (-) True AMCG00000275
AMCG00000272 mRNA downstream 331861 9194617 ~ 9210651 (-) True AMCG00000272
AMCG00000290 mRNA upstream 9466 9552242 ~ 9553191 (-) True AMCG00000290
AMCG00000291 mRNA upstream 20619 9563395 ~ 9570360 (-) True AMCG00000291
AMCG00000284 mRNA upstream 220839 9763615 ~ 9765768 (-) True AMCG00000284
AMCG00000309 mRNA upstream 378543 9921319 ~ 9925304 (-) True AMCG00000309
AMCG00000312 mRNA upstream 399649 9942425 ~ 9955020 (-) True AMCG00000312
TU187910 other downstream 1253 9540611 ~ 9541259 (-) True G149341
TU187888 other downstream 53903 9487879 ~ 9488609 (-) True G149321
TU187735 other downstream 496657 9035557 ~ 9045855 (-) False AMCG00000260
TU187495 other downstream 1435673 8095965 ~ 8106839 (-) True G149011
TU187302 other downstream 2179820 7361222 ~ 7362692 (-) True G148851
TU187980 other upstream 213605 9756381 ~ 9766794 (-) True G149395
TU188004 other upstream 288979 9831755 ~ 9832133 (-) True G149402
TU188051 other upstream 388194 9930970 ~ 9935550 (-) True G149441
TU188437 other upstream 2538767 12081543 ~ 12083214 (-) True G149751
TU188588 other upstream 2979744 12522520 ~ 12542310 (-) True G149847

Expression Profile