Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU188048 |
| length | 1086 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G149438 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 9919912 ~ 9921022 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0042737 | drug catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU188016 | lncRNA | downstream | 22162 | 9894546 ~ 9897750 (-) | True | G149414 |
| TU187976 | lncRNA | downstream | 172806 | 9744764 ~ 9747106 (-) | True | G149391 |
| TU187947 | lncRNA | downstream | 345781 | 9572134 ~ 9574131 (-) | True | G149367 |
| TU187915 | lncRNA | downstream | 374998 | 9544667 ~ 9544914 (-) | True | G149346 |
| TU187913 | lncRNA | downstream | 375882 | 9543587 ~ 9544030 (-) | True | G149344 |
| TU188096 | lncRNA | upstream | 108710 | 10029732 ~ 10030794 (-) | False | AMCG00000300 |
| TU188173 | lncRNA | upstream | 673704 | 10594726 ~ 10594935 (-) | True | G149532 |
| TU188180 | lncRNA | upstream | 791455 | 10712477 ~ 10712681 (-) | True | G149539 |
| TU188212 | lncRNA | upstream | 1212379 | 11133401 ~ 11134191 (-) | True | G149567 |
| TU188218 | lncRNA | upstream | 1254659 | 11175681 ~ 11176066 (-) | True | G149573 |
| AMCG00000284 | mRNA | downstream | 154144 | 9763615 ~ 9765768 (-) | True | AMCG00000284 |
| AMCG00000291 | mRNA | downstream | 349552 | 9563395 ~ 9570360 (-) | True | AMCG00000291 |
| AMCG00000290 | mRNA | downstream | 366721 | 9552242 ~ 9553191 (-) | True | AMCG00000290 |
| AMCG00000289 | mRNA | downstream | 418762 | 9498720 ~ 9501150 (-) | True | AMCG00000289 |
| AMCG00000279 | mRNA | downstream | 480576 | 9427499 ~ 9439336 (-) | True | AMCG00000279 |
| AMCG00000309 | mRNA | upstream | 297 | 9921319 ~ 9925304 (-) | True | AMCG00000309 |
| AMCG00000312 | mRNA | upstream | 21403 | 9942425 ~ 9955020 (-) | True | AMCG00000312 |
| AMCG00000308 | mRNA | upstream | 39872 | 9960894 ~ 9970582 (-) | True | AMCG00000308 |
| AMCG00000310 | mRNA | upstream | 51965 | 9972987 ~ 9997466 (-) | True | AMCG00000310 |
| AMCG00000311 | mRNA | upstream | 89114 | 10010136 ~ 10021096 (-) | True | AMCG00000311 |
| TU188004 | other | downstream | 87779 | 9831755 ~ 9832133 (-) | True | G149402 |
| TU187980 | other | downstream | 153118 | 9756381 ~ 9766794 (-) | True | G149395 |
| TU187910 | other | downstream | 378653 | 9540611 ~ 9541259 (-) | True | G149341 |
| TU187888 | other | downstream | 431303 | 9487879 ~ 9488609 (-) | True | G149321 |
| TU187735 | other | downstream | 874057 | 9035557 ~ 9045855 (-) | False | AMCG00000260 |
| TU188051 | other | upstream | 9948 | 9930970 ~ 9935550 (-) | True | G149441 |
| TU188437 | other | upstream | 2160521 | 12081543 ~ 12083214 (-) | True | G149751 |
| TU188588 | other | upstream | 2601498 | 12522520 ~ 12542310 (-) | True | G149847 |
| TU188948 | other | upstream | 3902932 | 13823954 ~ 13826709 (-) | True | G150138 |
| TU189195 | other | upstream | 4648940 | 14569962 ~ 14572432 (-) | True | AMCG00000436 |
