Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU188866 |
| length | 1288 |
| lncRNA type | read_through |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G150072 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 13599834 ~ 13682131 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0097458 | obsolete neuron part | cellular_component |
| GO:0001917 | photoreceptor inner segment | cellular_component |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU188783 | lncRNA | downstream | 631119 | 12966960 ~ 12968715 (-) | True | G150007 |
| TU188785 | lncRNA | downstream | 631119 | 12966960 ~ 12968715 (-) | False | G150007 |
| TU188787 | lncRNA | downstream | 631119 | 12966960 ~ 12968715 (-) | False | G150007 |
| TU188770 | lncRNA | downstream | 649706 | 12949925 ~ 12950128 (-) | True | G149996 |
| TU188769 | lncRNA | downstream | 650484 | 12947316 ~ 12949350 (-) | True | G149995 |
| TU188882 | lncRNA | upstream | 5640 | 13687771 ~ 13688177 (-) | True | G150086 |
| TU188915 | lncRNA | upstream | 57665 | 13739796 ~ 13746130 (-) | True | G150115 |
| TU188919 | lncRNA | upstream | 74385 | 13756516 ~ 13761597 (-) | True | G150119 |
| TU188988 | lncRNA | upstream | 320945 | 14003076 ~ 14019526 (-) | False | AMCG00000409 |
| TU189048 | lncRNA | upstream | 469457 | 14151588 ~ 14153846 (-) | True | G150219 |
| AMCG00000383 | mRNA | downstream | 373399 | 13146530 ~ 13226435 (-) | True | AMCG00000383 |
| AMCG00000382 | mRNA | downstream | 453311 | 13137786 ~ 13146523 (-) | True | AMCG00000382 |
| AMCG00000371 | mRNA | downstream | 635628 | 12954986 ~ 12964206 (-) | True | AMCG00000371 |
| AMCG00000375 | mRNA | downstream | 647658 | 12950875 ~ 12952176 (-) | True | AMCG00000375 |
| AMCG00000372 | mRNA | downstream | 667645 | 12921383 ~ 12932189 (-) | True | AMCG00000372 |
| AMCG00000391 | mRNA | upstream | 1896 | 13684027 ~ 13687008 (-) | True | AMCG00000391 |
| AMCG00000400 | mRNA | upstream | 9798 | 13691929 ~ 13693526 (-) | True | AMCG00000400 |
| AMCG00000399 | mRNA | upstream | 12547 | 13694678 ~ 13701429 (-) | True | AMCG00000399 |
| AMCG00000398 | mRNA | upstream | 25652 | 13707783 ~ 13729942 (-) | True | AMCG00000398 |
| AMCG00000397 | mRNA | upstream | 64048 | 13746179 ~ 13752105 (-) | True | AMCG00000397 |
| TU188588 | other | downstream | 1057524 | 12522520 ~ 12542310 (-) | True | G149847 |
| TU188437 | other | downstream | 1516620 | 12081543 ~ 12083214 (-) | True | G149751 |
| TU188051 | other | downstream | 3664284 | 9930970 ~ 9935550 (-) | True | G149441 |
| TU188004 | other | downstream | 3767701 | 9831755 ~ 9832133 (-) | True | G149402 |
| TU187980 | other | downstream | 3833040 | 9756381 ~ 9766794 (-) | True | G149395 |
| TU188948 | other | upstream | 141823 | 13823954 ~ 13826709 (-) | True | G150138 |
| TU189195 | other | upstream | 887831 | 14569962 ~ 14572432 (-) | True | AMCG00000436 |
| TU189371 | other | upstream | 1531283 | 15213414 ~ 15222743 (-) | True | AMCG00000464 |
| TU189419 | other | upstream | 1607221 | 15289352 ~ 15291236 (-) | False | AMCG00000475 |
| TU189692 | other | upstream | 3125961 | 16808092 ~ 16834326 (-) | True | G150729 |
