RNA id: AMCG00000699


Basic Information

Item Value
RNA id AMCG00000699
length 369
RNA type mRNA
GC content 0.62
exon number 2
gene id AMCG00000699
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 679014 ~ 680483 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCCCGGGCAGGCGGTGCCAGCTGATGGAGCAGATGTGTGCGCGGGGACAGAGAACAAGCTGAGCACCCTGTCAGACCTGGAGCAACAGTACCGGACACTGCGCAAGTACTACGAGAACTGTGAGGTGGTGATGGGCAACCTGGAGATCACCAGCATCGACCGAAACCGGGACCTGTCCTTCCTGCGGGTAGGTCCGGCGCTCTGTGCCGCGGCGATGTGCCGAGACCTGCTGACTGGGGGGTCAGGGCAGGGCGAGGGGGCTTCAGCGTCCTTGGCCCCCTGTCTCTGGGGCTCGTTGCCGCTGTTCACAGCTGCTCGATGGCTGTTTAACTCAGTTGTTGTGTTGTCGTGTTCACTGTGCGGGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU157452 lncRNA downstream 80679 597984 ~ 598335 (-) True G125625
TU157449 lncRNA downstream 151513 523521 ~ 527501 (-) True G125622
TU157417 lncRNA downstream 268197 409615 ~ 410817 (-) True G125591
TU157403 lncRNA downstream 302244 375820 ~ 376770 (-) True G125578
TU157308 lncRNA downstream 551351 121280 ~ 127663 (-) True G125515
TU157474 lncRNA upstream 206671 887154 ~ 887476 (-) True G125642
TU157532 lncRNA upstream 588748 1269231 ~ 1307353 (-) False G125685
TU157533 lncRNA upstream 589327 1269810 ~ 1307353 (-) False G125685
TU157535 lncRNA upstream 624100 1304583 ~ 1307353 (-) True G125685
TU157528 lncRNA upstream 624481 1304964 ~ 1307353 (-) False G125685
AMCG00000698 mRNA downstream 31601 643613 ~ 647413 (-) True AMCG00000698
AMCG00000700 mRNA downstream 66691 590845 ~ 612323 (-) True AMCG00000700
AMCG00000697 mRNA downstream 134858 542056 ~ 544156 (-) True AMCG00000697
AMCG00000696 mRNA downstream 142156 531041 ~ 536858 (-) True AMCG00000696
AMCG00000691 mRNA downstream 312898 354488 ~ 366116 (-) True AMCG00000691
AMCG00000701 mRNA upstream 161788 842271 ~ 859811 (-) True AMCG00000701
AMCG00000703 mRNA upstream 454985 1135468 ~ 1148599 (-) True AMCG00000703
AMCG00000706 mRNA upstream 473827 1154310 ~ 1205897 (-) True AMCG00000706
AMCG00000707 mRNA upstream 589870 1270353 ~ 1276004 (-) True AMCG00000707
AMCG00000710 mRNA upstream 627338 1307821 ~ 1312408 (-) True AMCG00000710
TU157359 other downstream 465402 194644 ~ 213612 (-) False AMCG00000687
TU157704 other upstream 706360 1386843 ~ 1422410 (-) True G125814
TU157731 other upstream 813499 1493982 ~ 1500661 (-) False AMCG00000719
TU157772 other upstream 1081779 1762262 ~ 1767476 (-) False AMCG00000731
TU157782 other upstream 1149064 1829547 ~ 1831310 (-) True AMCG00000741
TU157989 other upstream 1771385 2451868 ~ 2457883 (-) False G126017

Expression Profile