RNA id: AMCG00000745



Basic Information


Item Value
RNA id AMCG00000745
length 1179
RNA type mRNA
GC content 0.67
exon number 3
gene id AMCG00000745
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 1943648 ~ 1945167 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTACCTTCTGGACGGCGATTTCCCCGACAGGATGGACAGGGGGACCCCGCAACGCAAGACCGTGTACCGGATCTCTCTCACGCTGGTGAAGAAGGAGAGTTTGCCGGAGggaggcggcggcggcggcggcttGGCGCACCGGCGTCTGGAGAACCCCAAGCCGGGAGCTCACCGGCGAGAGGGCGCCTCTGAGATCCAGCGCAGCTGCCTgctggaagaggaggaagagggggacgAGAGCGACGACTTCTCGGCGCAGAACTACCTGCGCAACTTCAGGACGTTCAGCACCGGCCACCTGGAGCTGGGCCGGCTGAAGATCTCCAGGAAGACGCACCACTTCCACAAGGACCTATCGTTCAAGGTCCGGGAGGCCGGCACGGCCGGCGCGGCGGGAGCAGGTGAGCCTGCGGGGGACAGCGGCCCGGGTCGCCCGGCCAGTATGGTCGCCTCTCTGAACGTGGCGTTGCAGAACAGGAAGAACTGCTCTGCAGGTTCGGGGTCCCCCTCCCTGGCCCCCAAGGCAGCCGGTAAAGCGGGCAAGCCGGTTCCACAGACCCCTCCGCTCAAGAGGCACCCCAGCCTGCTGAGGAGGAGCTTCAGCTTCAGGCATTGGACAGGCGGGGAGCTGTTGCGCATCCGGGCCCTGACCCGGGAGAAGCACCACAACAGCTCCAGCTGTCTGGGCCAAGACCAGGGCCCGGACCCGGGGGCGGTGGTCCTACAGAACCCGGCCTTCGAGGAGTCCGGCGGTAGCGAGAAGAGGAACACGCTGGACGTGGGCGAGGTGCTGAACAAGACGGACTCCCTGACCGAGCTGAGCCGCTGGGACCGGGCCAAGGGCAAGAACCGCACCCTGGACAACAGCGACCTGCACCGGCTCTCTGAGAAGAGCCTGGAAGACAAGGAGAGCTTCCTGCGGGGCGGGGGGGCGCGGTCCAGCGGCCAGGAGCGCCGGCTGCTGCGCTTCTTCAGTGGCATCTTCTCCAAGAAGGACGGTACCTCCACACCGGTCAGCAGCCCCAGCGGCCGCTCCCTCAGGGACACCAAGAGGGGCCTGCTGGGCTCGGCCAAGAGGGCGGCGCTGGGGGGCTCCCAGTCCAGCACAGAGAGCGTCAACGGCTCTCCACTGAAGGgTGGATCTCaggtgtgcgtgcgtgtgtgtgtgtgcgtttga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU157676 lncRNA upstream 129491 1811683 ~ 1814157 (+) True AMCG00000734
TU157621 lncRNA upstream 321760 1617808 ~ 1621888 (+) True G125756
TU157646 lncRNA upstream 334438 1594823 ~ 1609210 (+) True G125767
TU157592 lncRNA upstream 516705 1426633 ~ 1426943 (+) True G125736
TU157567 lncRNA upstream 615009 1323503 ~ 1328639 (+) True G125713
TU157877 lncRNA downstream 346668 2291835 ~ 2293872 (+) True G125955
TU157948 lncRNA downstream 482503 2427670 ~ 2520585 (+) True G125986
TU158014 lncRNA downstream 612825 2557992 ~ 2558257 (+) True G126036
TU158024 lncRNA downstream 821088 2766255 ~ 2766539 (+) True G126044
TU158031 lncRNA downstream 925749 2870916 ~ 2885184 (+) True G126050
AMCG00000733 mRNA upstream 54483 1885580 ~ 1889165 (+) True AMCG00000733
AMCG00000735 mRNA upstream 58563 1874998 ~ 1885085 (+) True AMCG00000735
AMCG00000736 mRNA upstream 69956 1869579 ~ 1873692 (+) True AMCG00000736
AMCG00000737 mRNA upstream 112898 1824869 ~ 1830750 (+) True AMCG00000737
AMCG00000734 mRNA upstream 131414 1805407 ~ 1812234 (+) False AMCG00000734
AMCG00000750 mRNA downstream 19864 1965031 ~ 1969537 (+) True AMCG00000750
AMCG00000748 mRNA downstream 30222 1975389 ~ 1978780 (+) True AMCG00000748
AMCG00000749 mRNA downstream 41921 1987088 ~ 1993395 (+) True AMCG00000749
AMCG00000747 mRNA downstream 63595 2008762 ~ 2024346 (+) True AMCG00000747
AMCG00000746 mRNA downstream 89675 2034842 ~ 2037990 (+) True AMCG00000746
TU157662 other upstream 247401 1668845 ~ 1696247 (+) True AMCG00000729
TU157655 other upstream 343009 1599696 ~ 1600639 (+) False AMCG00000723
TU157377 other upstream 1601877 339640 ~ 341771 (+) False G125561
TU159397 other downstream 6672032 8617199 ~ 8620195 (+) True G127134
TU159756 other downstream 8202690 10147857 ~ 10154187 (+) False AMCG00000949
TU160309 other downstream 10054497 11999664 ~ 12011425 (+) True AMCG00001002
TU161370 other downstream 13224744 15169911 ~ 15174147 (+) True AMCG00001098
TU161504 other downstream 13463945 15409112 ~ 15420880 (+) False G128823

Expression Profile