RNA id: AMCG00000750



Basic Information


Item Value
RNA id AMCG00000750
length 948
RNA type mRNA
GC content 0.60
exon number 7
gene id AMCG00000750
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 1965031 ~ 1969537 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCTTGTTAGTGTAACTGCGTCTGTAAAAGCTGTGGTGGAACATGTCACCCAGTCATACATCCAGAGTAGCATCTCAACTGTGGCACAGATTGGGAGAGAGCGAGAAGGAGAGCGAAAGGTCAGCCGGGGAGTGATGGATGAGGGCTGCAGCGCGGCCGCTCGCGATTCGCCAGGCTCCCAGCAGATAATGGGCTCTGTTCATCACACAGGCACAGAGCGGTTCGTCCTGGTGAAGAGGGAGCGCGCCGTTTGGGCTGGGGTTCCTTGCCCTGGCTCGGGGTCCACTGTATTCACGGACGAATACAGGCACCAGGCGATGTTTTGTATGGTCTTGTTGCCTTGTGTTGCGAGTGTCcgcagccgtcgagctcccgAGGGCTGCGGTGGTTTTATAACCGAGCCCGGCACCTCGAGCTGTGCTGCCCTGGTTTCCATGGAGGGAAAGCCGCCCAGCCCTGCTCTGAATGGGGCGATCCAGGCCTGGCTGAGTGTCTGTTTCCCAGCtgatggtttaaaaataaagagtgGAGTAGCTGTGAGAGAGACTGCGCTGGAGTCCTTGAGCACCAGACTCGGAGCTCAGCCCAGTGTCCGAGTGCGAGAGCTCTGTGCCACACAGCCCTGTGTTACACAATCCAGTGCAGTGAGCCCACAGGCCTGGCGAGATGCGGTGCGAGTGGCAGGGATCCCTCCTGTGTTCCTCGGCCGCTGGAAATGGGATGCCTTTGTGAACAGTCAGGAGTGGACCCTGAGCCGATCGGTCCCCGAGCTCAAAGTGGGCATCGTGGGTAATCTGGCGAGCGGCAAGTCGGCGCTGGTGCACAGGACGACGCCAGTCCCAGTATCCACACTGGAGCTGAAAGTCAGAAGCACCAGGCCCTGCTCACGGCCCCTGCGTGCTCCGCCCCCCCGCGTTGCCGAAAGTGCCCCATCCCGCGTCCCTTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU157676 lncRNA upstream 150874 1811683 ~ 1814157 (+) True AMCG00000734
TU157621 lncRNA upstream 343143 1617808 ~ 1621888 (+) True G125756
TU157646 lncRNA upstream 355821 1594823 ~ 1609210 (+) True G125767
TU157592 lncRNA upstream 538088 1426633 ~ 1426943 (+) True G125736
TU157567 lncRNA upstream 636392 1323503 ~ 1328639 (+) True G125713
TU157877 lncRNA downstream 322298 2291835 ~ 2293872 (+) True G125955
TU157948 lncRNA downstream 458133 2427670 ~ 2520585 (+) True G125986
TU158014 lncRNA downstream 588455 2557992 ~ 2558257 (+) True G126036
TU158024 lncRNA downstream 796718 2766255 ~ 2766539 (+) True G126044
TU158031 lncRNA downstream 901379 2870916 ~ 2885184 (+) True G126050
AMCG00000745 mRNA upstream 19864 1943648 ~ 1945167 (+) True AMCG00000745
AMCG00000733 mRNA upstream 75866 1885580 ~ 1889165 (+) True AMCG00000733
AMCG00000735 mRNA upstream 79946 1874998 ~ 1885085 (+) True AMCG00000735
AMCG00000736 mRNA upstream 91339 1869579 ~ 1873692 (+) True AMCG00000736
AMCG00000737 mRNA upstream 134281 1824869 ~ 1830750 (+) True AMCG00000737
AMCG00000748 mRNA downstream 5852 1975389 ~ 1978780 (+) True AMCG00000748
AMCG00000749 mRNA downstream 17551 1987088 ~ 1993395 (+) True AMCG00000749
AMCG00000747 mRNA downstream 39225 2008762 ~ 2024346 (+) True AMCG00000747
AMCG00000746 mRNA downstream 65305 2034842 ~ 2037990 (+) True AMCG00000746
AMCG00000752 mRNA downstream 83650 2053187 ~ 2054534 (+) True AMCG00000752
TU157662 other upstream 268784 1668845 ~ 1696247 (+) True AMCG00000729
TU157655 other upstream 364392 1599696 ~ 1600639 (+) False AMCG00000723
TU157377 other upstream 1623260 339640 ~ 341771 (+) False G125561
TU159397 other downstream 6647662 8617199 ~ 8620195 (+) True G127134
TU159756 other downstream 8178320 10147857 ~ 10154187 (+) False AMCG00000949
TU160309 other downstream 10030127 11999664 ~ 12011425 (+) True AMCG00001002
TU161370 other downstream 13200374 15169911 ~ 15174147 (+) True AMCG00001098
TU161504 other downstream 13439575 15409112 ~ 15420880 (+) False G128823

Expression Profile