Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00000781 |
| length | 1156 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 5 |
| gene id | AMCG00000781 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 3214160 ~ 3225281 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0043603 | cellular amide metabolic process | biological_process |
| GO:0043604 | amide biosynthetic process | biological_process |
| GO:0043043 | peptide biosynthetic process | biological_process |
| GO:0006412 | translation | biological_process |
| GO:0010467 | gene expression | biological_process |
| GO:0006518 | peptide metabolic process | biological_process |
| id | description |
|---|---|
| ko03010 | Ribosome |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU158053 | lncRNA | upstream | 130573 | 3081746 ~ 3083587 (+) | True | G126068 |
| TU158038 | lncRNA | upstream | 145697 | 3010243 ~ 3068463 (+) | True | G126054 |
| TU158031 | lncRNA | upstream | 328976 | 2870916 ~ 2885184 (+) | True | G126050 |
| TU158024 | lncRNA | upstream | 447621 | 2766255 ~ 2766539 (+) | True | G126044 |
| TU158014 | lncRNA | upstream | 655903 | 2557992 ~ 2558257 (+) | True | G126036 |
| TU158251 | lncRNA | downstream | 330285 | 3555566 ~ 3558424 (+) | True | G126215 |
| TU158279 | lncRNA | downstream | 427392 | 3652673 ~ 3656581 (+) | True | G126240 |
| TU158294 | lncRNA | downstream | 445521 | 3670802 ~ 3673176 (+) | True | G126248 |
| TU158362 | lncRNA | downstream | 500639 | 3725920 ~ 3730056 (+) | True | G126301 |
| TU158436 | lncRNA | downstream | 1019451 | 4244732 ~ 4245036 (+) | True | G126368 |
| AMCG00000773 | mRNA | upstream | 33042 | 3158416 ~ 3181118 (+) | True | AMCG00000773 |
| AMCG00000772 | mRNA | upstream | 58651 | 3142257 ~ 3155509 (+) | True | AMCG00000772 |
| AMCG00000774 | mRNA | upstream | 80965 | 3122348 ~ 3133195 (+) | True | AMCG00000774 |
| AMCG00000767 | mRNA | upstream | 152448 | 3056422 ~ 3061712 (+) | True | AMCG00000767 |
| AMCG00000768 | mRNA | upstream | 176427 | 3024518 ~ 3037733 (+) | True | AMCG00000768 |
| AMCG00000783 | mRNA | downstream | 1032 | 3226313 ~ 3233199 (+) | True | AMCG00000783 |
| AMCG00000780 | mRNA | downstream | 14954 | 3240235 ~ 3249229 (+) | True | AMCG00000780 |
| AMCG00000782 | mRNA | downstream | 26529 | 3251810 ~ 3258580 (+) | True | AMCG00000782 |
| AMCG00000779 | mRNA | downstream | 36900 | 3262181 ~ 3263241 (+) | True | AMCG00000779 |
| AMCG00000787 | mRNA | downstream | 89587 | 3314868 ~ 3373247 (+) | True | AMCG00000787 |
| TU157662 | other | upstream | 1517913 | 1668845 ~ 1696247 (+) | True | AMCG00000729 |
| TU157655 | other | upstream | 1613521 | 1599696 ~ 1600639 (+) | False | AMCG00000723 |
| TU157377 | other | upstream | 2872389 | 339640 ~ 341771 (+) | False | G125561 |
| TU159397 | other | downstream | 5391918 | 8617199 ~ 8620195 (+) | True | G127134 |
| TU159756 | other | downstream | 6922576 | 10147857 ~ 10154187 (+) | False | AMCG00000949 |
| TU160309 | other | downstream | 8774383 | 11999664 ~ 12011425 (+) | True | AMCG00001002 |
| TU161370 | other | downstream | 11944630 | 15169911 ~ 15174147 (+) | True | AMCG00001098 |
| TU161504 | other | downstream | 12183831 | 15409112 ~ 15420880 (+) | False | G128823 |
