RNA id: AMCG00000786



Basic Information


Item Value
RNA id AMCG00000786
length 285
RNA type mRNA
GC content 0.61
exon number 2
gene id AMCG00000786
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 3378438 ~ 3385899 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGGGAAGACCACCACCGGCTCGTACAGGATCCGGATATATGAGCGGCCTGACTTTGCTGGTCACATGATGGAGTTCTCAGAGGACAATCCCGCCGTGTATGAGCGTTTCCGCCACAGGGAGGTCCACTCCTGCAGCGTGCTGGACGGCGCCTGGGTGTTCTTCGAGCACCCCAACTACCGTGGGCGGCAGTACCTGCTGGAGCGCGGAGAGTACCGCCGTTACGCAGACTGGGGCGCGATGCACGCTGCCGTCGGCTCCTTCAGACGCATCATGGAGTTTTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU158053 lncRNA upstream 294851 3081746 ~ 3083587 (+) True G126068
TU158038 lncRNA upstream 309975 3010243 ~ 3068463 (+) True G126054
TU158031 lncRNA upstream 493254 2870916 ~ 2885184 (+) True G126050
TU158024 lncRNA upstream 611899 2766255 ~ 2766539 (+) True G126044
TU158014 lncRNA upstream 820181 2557992 ~ 2558257 (+) True G126036
TU158251 lncRNA downstream 169667 3555566 ~ 3558424 (+) True G126215
TU158279 lncRNA downstream 266774 3652673 ~ 3656581 (+) True G126240
TU158294 lncRNA downstream 284903 3670802 ~ 3673176 (+) True G126248
TU158362 lncRNA downstream 340021 3725920 ~ 3730056 (+) True G126301
TU158436 lncRNA downstream 858833 4244732 ~ 4245036 (+) True G126368
AMCG00000787 mRNA upstream 5191 3314868 ~ 3373247 (+) True AMCG00000787
AMCG00000779 mRNA upstream 115197 3262181 ~ 3263241 (+) True AMCG00000779
AMCG00000782 mRNA upstream 119858 3251810 ~ 3258580 (+) True AMCG00000782
AMCG00000780 mRNA upstream 129209 3240235 ~ 3249229 (+) True AMCG00000780
AMCG00000783 mRNA upstream 145239 3226313 ~ 3233199 (+) True AMCG00000783
AMCG00000789 mRNA downstream 51384 3437283 ~ 3482542 (+) True AMCG00000789
AMCG00000792 mRNA downstream 104842 3490741 ~ 3504965 (+) True AMCG00000792
AMCG00000791 mRNA downstream 131823 3517722 ~ 3522353 (+) True AMCG00000791
AMCG00000793 mRNA downstream 147240 3533139 ~ 3547238 (+) True AMCG00000793
AMCG00000790 mRNA downstream 183514 3569413 ~ 3575908 (+) True AMCG00000790
TU157662 other upstream 1682191 1668845 ~ 1696247 (+) True AMCG00000729
TU157655 other upstream 1777799 1599696 ~ 1600639 (+) False AMCG00000723
TU157377 other upstream 3036667 339640 ~ 341771 (+) False G125561
TU159397 other downstream 5231300 8617199 ~ 8620195 (+) True G127134
TU159756 other downstream 6761958 10147857 ~ 10154187 (+) False AMCG00000949
TU160309 other downstream 8613765 11999664 ~ 12011425 (+) True AMCG00001002
TU161370 other downstream 11784012 15169911 ~ 15174147 (+) True AMCG00001098
TU161504 other downstream 12023213 15409112 ~ 15420880 (+) False G128823

Expression Profile