Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00000806 |
| length | 825 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 3 |
| gene id | AMCG00000806 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 3686259 ~ 3698536 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005581 | collagen trimer | cellular_component |
| id | description |
|---|---|
| K23284 | C1QL; C1q-related factor |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU158294 | lncRNA | upstream | 13083 | 3670802 ~ 3673176 (+) | True | G126248 |
| TU158279 | lncRNA | upstream | 29678 | 3652673 ~ 3656581 (+) | True | G126240 |
| TU158251 | lncRNA | upstream | 127835 | 3555566 ~ 3558424 (+) | True | G126215 |
| TU158053 | lncRNA | upstream | 602672 | 3081746 ~ 3083587 (+) | True | G126068 |
| TU158038 | lncRNA | upstream | 617796 | 3010243 ~ 3068463 (+) | True | G126054 |
| TU158362 | lncRNA | downstream | 27384 | 3725920 ~ 3730056 (+) | True | G126301 |
| TU158436 | lncRNA | downstream | 546196 | 4244732 ~ 4245036 (+) | True | G126368 |
| TU158587 | lncRNA | downstream | 1178331 | 4876867 ~ 4880503 (+) | True | G126500 |
| TU158588 | lncRNA | downstream | 1178331 | 4876867 ~ 4877646 (+) | False | G126500 |
| TU158693 | lncRNA | downstream | 1422509 | 5121045 ~ 5124330 (+) | True | G126568 |
| AMCG00000799 | mRNA | upstream | 25721 | 3656867 ~ 3660538 (+) | True | AMCG00000799 |
| AMCG00000797 | mRNA | upstream | 34382 | 3638170 ~ 3651877 (+) | True | AMCG00000797 |
| AMCG00000798 | mRNA | upstream | 94117 | 3583180 ~ 3592142 (+) | True | AMCG00000798 |
| AMCG00000790 | mRNA | upstream | 110351 | 3569413 ~ 3575908 (+) | True | AMCG00000790 |
| AMCG00000793 | mRNA | upstream | 139021 | 3533139 ~ 3547238 (+) | True | AMCG00000793 |
| AMCG00000805 | mRNA | downstream | 64283 | 3762819 ~ 3763343 (+) | True | AMCG00000805 |
| AMCG00000808 | mRNA | downstream | 210118 | 3908654 ~ 3928160 (+) | True | AMCG00000808 |
| AMCG00000812 | mRNA | downstream | 303590 | 4002126 ~ 4047678 (+) | True | AMCG00000812 |
| AMCG00000816 | mRNA | downstream | 600995 | 4299531 ~ 4306351 (+) | True | AMCG00000816 |
| AMCG00000814 | mRNA | downstream | 631832 | 4330368 ~ 4349297 (+) | True | AMCG00000814 |
| TU157662 | other | upstream | 1990012 | 1668845 ~ 1696247 (+) | True | AMCG00000729 |
| TU157655 | other | upstream | 2085620 | 1599696 ~ 1600639 (+) | False | AMCG00000723 |
| TU157377 | other | upstream | 3344488 | 339640 ~ 341771 (+) | False | G125561 |
| TU159397 | other | downstream | 4918663 | 8617199 ~ 8620195 (+) | True | G127134 |
| TU159756 | other | downstream | 6449321 | 10147857 ~ 10154187 (+) | False | AMCG00000949 |
| TU160309 | other | downstream | 8301128 | 11999664 ~ 12011425 (+) | True | AMCG00001002 |
| TU161370 | other | downstream | 11471375 | 15169911 ~ 15174147 (+) | True | AMCG00001098 |
| TU161504 | other | downstream | 11710576 | 15409112 ~ 15420880 (+) | False | G128823 |
