Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00000809 |
| length | 1044 |
| RNA type | mRNA |
| GC content | 0.60 |
| exon number | 2 |
| gene id | AMCG00000809 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 3930277 ~ 3933300 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007210 | serotonin receptor signaling pathway | biological_process |
| GO:0005887 | integral component of plasma membrane | cellular_component |
| GO:0004993 | G protein-coupled serotonin receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU158357 | lncRNA | downstream | 253350 | 3674281 ~ 3676927 (-) | True | G126296 |
| TU158314 | lncRNA | downstream | 273716 | 3553047 ~ 3656561 (-) | True | AMCG00000804 |
| TU158325 | lncRNA | downstream | 377300 | 3550840 ~ 3552977 (-) | True | G126275 |
| TU158101 | lncRNA | downstream | 794364 | 3133876 ~ 3135913 (-) | False | AMCG00000777 |
| TU158015 | lncRNA | downstream | 1372028 | 2557991 ~ 2558249 (-) | True | G126037 |
| TU158437 | lncRNA | upstream | 311429 | 4244729 ~ 4245041 (-) | True | G126369 |
| TU158504 | lncRNA | upstream | 704067 | 4637367 ~ 4637640 (-) | True | G126428 |
| TU158505 | lncRNA | upstream | 704658 | 4637958 ~ 4638285 (-) | True | G126429 |
| TU158506 | lncRNA | upstream | 707758 | 4641058 ~ 4641341 (-) | True | G126430 |
| TU158508 | lncRNA | upstream | 709380 | 4642680 ~ 4643466 (-) | True | G126432 |
| AMCG00000811 | mRNA | downstream | 35326 | 3891023 ~ 3894951 (-) | True | AMCG00000811 |
| AMCG00000807 | mRNA | downstream | 184722 | 3720413 ~ 3745555 (-) | True | AMCG00000807 |
| AMCG00000802 | mRNA | downstream | 262826 | 3662247 ~ 3667451 (-) | True | AMCG00000802 |
| AMCG00000804 | mRNA | downstream | 273725 | 3652686 ~ 3656552 (-) | False | AMCG00000804 |
| AMCG00000801 | mRNA | downstream | 279419 | 3650316 ~ 3650858 (-) | True | AMCG00000801 |
| AMCG00000810 | mRNA | upstream | 1497 | 3934797 ~ 3941315 (-) | True | AMCG00000810 |
| AMCG00000813 | mRNA | upstream | 134644 | 4067944 ~ 4088896 (-) | True | AMCG00000813 |
| AMCG00000818 | mRNA | upstream | 383718 | 4317018 ~ 4326577 (-) | True | AMCG00000818 |
| AMCG00000817 | mRNA | upstream | 447315 | 4380615 ~ 4387720 (-) | True | AMCG00000817 |
| AMCG00000821 | mRNA | upstream | 468439 | 4401739 ~ 4404141 (-) | True | AMCG00000821 |
| TU158313 | other | downstream | 273716 | 3652657 ~ 3656561 (-) | False | AMCG00000804 |
| TU158094 | other | downstream | 781025 | 3131714 ~ 3149252 (-) | True | G126096 |
| TU158093 | other | downstream | 796460 | 3131714 ~ 3133817 (-) | False | G126096 |
| TU158081 | other | downstream | 880326 | 3044257 ~ 3049951 (-) | True | AMCG00000771 |
| TU158078 | other | downstream | 888313 | 3036931 ~ 3041964 (-) | True | G126089 |
| TU158503 | other | upstream | 702796 | 4636096 ~ 4636516 (-) | True | G126427 |
| TU158856 | other | upstream | 1639405 | 5572705 ~ 5573027 (-) | True | G126700 |
| TU159187 | other | upstream | 2778658 | 6711958 ~ 6733817 (-) | False | AMCG00000888 |
| TU159288 | other | upstream | 3696615 | 7629915 ~ 7645722 (-) | True | G127039 |
| TU159607 | other | upstream | 5485696 | 9418996 ~ 9419325 (-) | True | G127292 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000004_10582152_10586349.mRNA | True | 1270 | mRNA | 0.49 | 2 | CI01000004 | 10582121 ~ 10586553 (+) |
