RNA id: AMCG00000813


Basic Information

Item Value
RNA id AMCG00000813
length 2834
RNA type mRNA
GC content 0.45
exon number 20
gene id AMCG00000813
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 4067944 ~ 4088896 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CAAAATCAGTGCTCGTGATTAGACACCTCAATCTCTAGACCTCAACCTCAAAAGGAAGTGACCTAGTATGACCTGAAAAAGCAGTCCACAAGTGCAAACTGACTTTGTTAATGTAAATGCATAGGAGAATATCGTAAACATAACTGAGCCTCAGTTCCAGACGTACATGAATATAtgacagtttgtCTAGacctttcattctttctttcttgctttagGTGTACCGGTATTCCTACACTGCATCCTATCTTATGTACAACATACATACAAGggAAGTGCTGGAGCTAAACCCCCCAGAGGTGACTAACTCGGTTTTACAGCACGCGGCCTGGGGAGTAGATGGACAACAACTGATCTACATTTTCGAGAACAACATCTACTACCGATCTGATGTCAAAAGCAATTCACTGAGGCTCACGTCATCGGGAAAAGAGGGAGTCATTTTCAATGGAATCGCCGACTGGCTGTACGAAGAGGAGATCCTGCGGTCCCACGTCGCTCACTGGTGGTCCCCTGATGGAGAGAGGCTGGCGTTCCTCATGATTAATGACTCGTTGGTATCAAACATGGCCCTTCCTCATTTCACCGGCAGTCTGTATCCCAGAGGAAAGCAATACCCGTACCCTAAGGCTGGGCAGACAAACCCCACTGTAAAACTTTATGTCGTCAACTTATACGGACCGACACACACTCAGGAACTGACTCCTCCAGACAGCCTCAAAGCCAGGGAGCATTATGTTGTGATGGTGAAGTGGATCAGCAATACTAAGACTGCAGTAAGGTGGATAAACCGCCCTCAAAACATCTCCATCCTGACCGTGTGCGACACAACCATCGGGGCCTGCAGCAAGAACGAAGAACCGGTGTTTTCAAAGGACGgcaataaactatttttaactGTTCCGGTAAAACAAGGCGGACGAGGGGAGTTCCACCACATTGCGATGTATCACGTACAGTCTAAAAGCGATCAAAACAATGTTCGCCATTTAACATCAGGGAACTGGGAAGTCATCAAAATCCTTGCTTACGACGATAAAAGTCAGAGCCTCGTTTCCACCGTGGGCTTATTCCCCCGCCACTGCCTGACCTGCGACTTCAACAAGACGCGATGCACGTTCTTCAGTGCTGACATCAGTCCCGACCATCGACACGTCCTCTTACACTGTAAAGGTCCTGGAATTCCCATGGTCGTTGTACTCAGTATGAGTAACACTAATAATTATATCATGTTGGAGAATAACTCTGTGCTAGAAGGAGTAATAGCAAACAAAAAGATTCAAAAGCCAGAGTTCAAGACCATTTCCGTCGAAGACTTTGaGCTGCCACTGAAACTCTCCTACCCGGTAGACTTCTCCGAATCACGGCAGTACGGCCTCCTCTTGGTTGTTGACGGCGCTCCCGGCAGTCAGTCGGTGAATGACAGGTATCGCCTTGACTGGGATGCGGTGCTTGTCAGCTCTGACAGCGTCATTGTTGCTCGGTTTGATGGCAGAGGAAGTGGGTTTCAAGGACAGAAGATCTTACAGCAAGTCCATCAGCGTTTGGGCCCCGTGGAAGTAGAAGATCAGTTAGCAGCTCTGGGGTACCTGATGAAACTTCCATACATTGACCCAGCGCGGATAGGGATATTTGGAaagGCCTATGGCGGATTTGTTACGTTAATGATGCTGAAATCGACAGAAATACGGTTTAAATGTTCAGTTGCGATGTCTCCGGTAACAAACTGGAAATTGTATGCATCAGCGTTTTCAGAGAGATACATTGGACTGCCATCAGTGGGAGAAAGTAATTACcagGTTTCCAGTGTGCTACACAACCTGCAAGGATTAACTGAACACAATGTAATGTTAATACATGGGACAGCTGATGCCAACATCCACTTTCAACACTCAGCAGAATTGATCAAACACTTAATAAAAGCTGGAGCTAACTACACTATGCAGATCTACCCAGACGAAGGGCATTTTGTGTCTCAGAGAAGCCGACAGCATCTGTACAGCTCCCTCATCACCCTCTTCAGAGAGTGTCTCAAGGAAGACACGTTGCTATTACCAGAGGAGCCGGAAGAGGACGAATAGGCAGAGAGGCAACTGGAAggactttttaatgtattcccGTAATGACTACTGGAGCCTCGCAGGCTCGGAAACCAAGCATTGGCTAGAGATGACTTGTTGAAGTCGAGAGGTGTCGGGGGCTTAAGGAGAGATAAAGGATTTCAATCAGTGGAACAGCACAGTAAAGTTAGTGGGCAAACAATCTGGATTTCACATATCAGTCTCATCATAATCTTCGATTTAGAAATCTCCGGCGGAAGGGGCACAGGTCTGCTTCTTCTGCCCGGGAGAATTTAGTTTCCCGTCCATAATTAAGTGcatgattatttttgttgagCCCTCACCTGTTTTCCATGTAAATATTCGTTGTGGTAGCAATTCAACTCCAACGTGTACCAACTTCCCCTTTTGtataaatgcacaatgaaatGCTACACCTACCTTTGATGTCAGAAATGCAAACTTCAAGGTTACTGTGAGACCTGAAAATAAGTGCAATTCCTTCACGATCCTTTCTCATGTTCACCCAATAAAGATACAGTATTTTGTACAATACTGCAGAGTGTGTACATACCTATATATTTTTGAGAGATGTCCCGTCCGATAGCTGTCTAAAACATgtacctttctttttctttggatgtgttttgtaatgcttgttaATTTTTCTCTTTTGGTGTTTTCTAGGGGAGGGATAGCTGGGTGTGGATTTGGGAGGTTATTGTTATTGTCTTCTTAGGtattaacatgaataaataaaccttaCTAAAGATG

Function

GO: NA

KEGG:

id description
K23014 DPP10; inactive dipeptidyl peptidase 10

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU158357 lncRNA downstream 391017 3674281 ~ 3676927 (-) True G126296
TU158314 lncRNA downstream 411383 3553047 ~ 3656561 (-) True AMCG00000804
TU158325 lncRNA downstream 514967 3550840 ~ 3552977 (-) True G126275
TU158101 lncRNA downstream 932031 3133876 ~ 3135913 (-) False AMCG00000777
TU158015 lncRNA downstream 1509695 2557991 ~ 2558249 (-) True G126037
TU158437 lncRNA upstream 155833 4244729 ~ 4245041 (-) True G126369
TU158504 lncRNA upstream 548471 4637367 ~ 4637640 (-) True G126428
TU158505 lncRNA upstream 549062 4637958 ~ 4638285 (-) True G126429
TU158506 lncRNA upstream 552162 4641058 ~ 4641341 (-) True G126430
TU158508 lncRNA upstream 553784 4642680 ~ 4643466 (-) True G126432
AMCG00000810 mRNA downstream 126629 3934797 ~ 3941315 (-) True AMCG00000810
AMCG00000809 mRNA downstream 134644 3930277 ~ 3933300 (-) True AMCG00000809
AMCG00000811 mRNA downstream 172993 3891023 ~ 3894951 (-) True AMCG00000811
AMCG00000807 mRNA downstream 322389 3720413 ~ 3745555 (-) True AMCG00000807
AMCG00000802 mRNA downstream 400493 3662247 ~ 3667451 (-) True AMCG00000802
AMCG00000818 mRNA upstream 228122 4317018 ~ 4326577 (-) True AMCG00000818
AMCG00000817 mRNA upstream 291719 4380615 ~ 4387720 (-) True AMCG00000817
AMCG00000821 mRNA upstream 312843 4401739 ~ 4404141 (-) True AMCG00000821
AMCG00000820 mRNA upstream 340851 4429747 ~ 4464744 (-) True AMCG00000820
AMCG00000825 mRNA upstream 558065 4646961 ~ 4651113 (-) True AMCG00000825
TU158313 other downstream 411383 3652657 ~ 3656561 (-) False AMCG00000804
TU158094 other downstream 918692 3131714 ~ 3149252 (-) True G126096
TU158093 other downstream 934127 3131714 ~ 3133817 (-) False G126096
TU158081 other downstream 1017993 3044257 ~ 3049951 (-) True AMCG00000771
TU158078 other downstream 1025980 3036931 ~ 3041964 (-) True G126089
TU158503 other upstream 547200 4636096 ~ 4636516 (-) True G126427
TU158856 other upstream 1483809 5572705 ~ 5573027 (-) True G126700
TU159187 other upstream 2623062 6711958 ~ 6733817 (-) False AMCG00000888
TU159288 other upstream 3541019 7629915 ~ 7645722 (-) True G127039
TU159607 other upstream 5330100 9418996 ~ 9419325 (-) True G127292

Expression Profile