Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00000840 |
| length | 1047 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 2 |
| gene id | AMCG00000840 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 5039948 ~ 5048084 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0045471 | response to ethanol | biological_process |
| GO:0035556 | intracellular signal transduction | biological_process |
| GO:0009190 | cyclic nucleotide biosynthetic process | biological_process |
| GO:0001932 | regulation of protein phosphorylation | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004016 | adenylate cyclase activity | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU158587 | lncRNA | upstream | 159445 | 4876867 ~ 4880503 (+) | True | G126500 |
| TU158588 | lncRNA | upstream | 162302 | 4876867 ~ 4877646 (+) | False | G126500 |
| TU158436 | lncRNA | upstream | 794912 | 4244732 ~ 4245036 (+) | True | G126368 |
| TU158362 | lncRNA | upstream | 1309892 | 3725920 ~ 3730056 (+) | True | G126301 |
| TU158294 | lncRNA | upstream | 1366772 | 3670802 ~ 3673176 (+) | True | G126248 |
| TU158693 | lncRNA | downstream | 72961 | 5121045 ~ 5124330 (+) | True | G126568 |
| TU158694 | lncRNA | downstream | 73120 | 5121204 ~ 5123938 (+) | False | G126568 |
| TU158695 | lncRNA | downstream | 78475 | 5126559 ~ 5126808 (+) | True | G126569 |
| TU158696 | lncRNA | downstream | 79230 | 5127314 ~ 5127656 (+) | True | G126570 |
| TU158698 | lncRNA | downstream | 80423 | 5128507 ~ 5130661 (+) | True | G126572 |
| AMCG00000837 | mRNA | upstream | 5251 | 5025295 ~ 5034697 (+) | True | AMCG00000837 |
| AMCG00000832 | mRNA | upstream | 176100 | 4844092 ~ 4863848 (+) | True | AMCG00000832 |
| AMCG00000831 | mRNA | upstream | 201068 | 4833357 ~ 4838880 (+) | True | AMCG00000831 |
| AMCG00000834 | mRNA | upstream | 216054 | 4819205 ~ 4823894 (+) | True | AMCG00000834 |
| AMCG00000833 | mRNA | upstream | 235606 | 4792109 ~ 4804342 (+) | True | AMCG00000833 |
| AMCG00000841 | mRNA | downstream | 33772 | 5081856 ~ 5115984 (+) | True | AMCG00000841 |
| AMCG00000844 | mRNA | downstream | 173913 | 5221997 ~ 5265705 (+) | True | AMCG00000844 |
| AMCG00000845 | mRNA | downstream | 268113 | 5316197 ~ 5332706 (+) | True | AMCG00000845 |
| AMCG00000849 | mRNA | downstream | 349241 | 5397325 ~ 5404570 (+) | True | AMCG00000849 |
| AMCG00000847 | mRNA | downstream | 378077 | 5426161 ~ 5441254 (+) | True | AMCG00000847 |
| TU157662 | other | upstream | 3343701 | 1668845 ~ 1696247 (+) | True | AMCG00000729 |
| TU157655 | other | upstream | 3439309 | 1599696 ~ 1600639 (+) | False | AMCG00000723 |
| TU157377 | other | upstream | 4698177 | 339640 ~ 341771 (+) | False | G125561 |
| TU159397 | other | downstream | 3569115 | 8617199 ~ 8620195 (+) | True | G127134 |
| TU159756 | other | downstream | 5099773 | 10147857 ~ 10154187 (+) | False | AMCG00000949 |
| TU160309 | other | downstream | 6951580 | 11999664 ~ 12011425 (+) | True | AMCG00001002 |
| TU161370 | other | downstream | 10121827 | 15169911 ~ 15174147 (+) | True | AMCG00001098 |
| TU161504 | other | downstream | 10361028 | 15409112 ~ 15420880 (+) | False | G128823 |
