RNA id: AMCG00000963


Basic Information

Item Value
RNA id AMCG00000963
length 618
RNA type mRNA
GC content 0.45
exon number 2
gene id AMCG00000963
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 10749030 ~ 10752068 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGACTTGTGAGAGAGAAGAAACCTTCCTGTGGCTAATAAATGATTGCTTCCGGAATAAAATAACGAGCCTGATGCAAGTGGTGCCTGTCTTGGATCATATCAGCTTCATACAACGTGAAGAAAAGGAGATTATCATCAATAAAGCCAGAACAGAAAGTAATGTCCGGGCCGCAGACCTTCTCCTCCATTCAATCATCAAAAACCCACGTCCTGTGGGCTGGTTTAGGGAGTTTGTGAATGCACTGGAGTTTGGGGGGTGCAAACATGCTGCCATCTATGCGGATCCAAGCCAAATGCCAACCCCTTCTCTGGAAGCCGAGAACGACTACTGTGTCAGCCTCATCCACCTGCTGGCTCCCAATCTTGTAAATAAGATCAAACCCCGTGATGTCGCCTTATTTTGTTGTGAATTGGATATACTGACTATGGAAGACAAAGAGAATatattAGCAGAAACTGATAATCATGGAAATATAAATGGTGCACGATTACTTCTACGAAGAATAGTTCAAAAGCCCCCTGGCTGGTTTTCTGACTTTCTGAAAGCACTACAGAGAGCACAACATGGGGATCTGGTCATGGAACTGACAGGAGGCCCATCTGATGGCACAGAGGAC

Function

GO:

id name namespace
GO:0016817 hydrolase activity, acting on acid anhydrides molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU159952 lncRNA downstream 132803 10615930 ~ 10616227 (-) True G127573
TU159927 lncRNA downstream 182381 10564927 ~ 10566649 (-) True G127555
TU159830 lncRNA downstream 353104 10391304 ~ 10395926 (-) True G127478
TU159757 lncRNA downstream 598096 10147775 ~ 10150934 (-) True G127420
TU159671 lncRNA downstream 918340 9824796 ~ 9830690 (-) True G127346
TU160019 lncRNA upstream 5802 10757870 ~ 10759494 (-) True G127631
TU160081 lncRNA upstream 456473 11208541 ~ 11247944 (-) True G127678
TU160125 lncRNA upstream 644642 11396710 ~ 11407860 (-) True G127718
TU160154 lncRNA upstream 853736 11605804 ~ 11606176 (-) True G127740
TU160156 lncRNA upstream 857203 11609271 ~ 11609630 (-) True G127742
AMCG00000962 mRNA downstream 11754 10725849 ~ 10737276 (-) True AMCG00000962
AMCG00000961 mRNA downstream 25148 10702960 ~ 10723882 (-) True AMCG00000961
AMCG00000960 mRNA downstream 48666 10696856 ~ 10700364 (-) True AMCG00000960
AMCG00000956 mRNA downstream 234773 10489430 ~ 10514257 (-) True AMCG00000956
AMCG00000954 mRNA downstream 272498 10469429 ~ 10476532 (-) True AMCG00000954
AMCG00000964 mRNA upstream 10902 10762970 ~ 10807821 (-) True AMCG00000964
AMCG00000965 mRNA upstream 88045 10840113 ~ 10841698 (-) True AMCG00000965
AMCG00000968 mRNA upstream 179484 10931552 ~ 10933795 (-) True AMCG00000968
AMCG00000970 mRNA upstream 325044 11077112 ~ 11100449 (-) True AMCG00000970
AMCG00000969 mRNA upstream 383656 11135724 ~ 11155356 (-) True AMCG00000969
TU159975 other downstream 48682 10697707 ~ 10700348 (-) False AMCG00000960
TU159787 other downstream 470819 10274687 ~ 10278211 (-) True G127443
TU159607 other downstream 1329705 9418996 ~ 9419325 (-) True G127292
TU159288 other downstream 3103308 7629915 ~ 7645722 (-) True G127039
TU159187 other downstream 4015213 6711958 ~ 6733817 (-) False AMCG00000888
TU160686 other upstream 1980116 12732184 ~ 12751516 (-) True G128160
TU160833 other upstream 2604915 13356983 ~ 13359770 (-) True AMCG00001061
TU161258 other upstream 3840631 14592699 ~ 14598570 (-) True G128628
TU161398 other upstream 4427173 15179241 ~ 15180322 (-) True G128741
TU161519 other upstream 4611999 15364067 ~ 15433469 (-) True AMCG00001118

Expression Profile