RNA id: AMCG00000964


Basic Information

Item Value
RNA id AMCG00000964
length 3236
RNA type mRNA
GC content 0.47
exon number 14
gene id AMCG00000964
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 10762970 ~ 10807821 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGTCCATTTTCATGTGCAACACTCATATAATCCCGGTGAAGAATGAAGAAGGCGTGGTGATGATGTTCATCCTAAACTTTGATTATGTTCTGGAAGAAGGAAGCAGTGACTCTTTAGAAAGGCTGAACCACACATCCCCTGCCAAATCTGAGCACCgAAAAGGAAGGTTTTTCAGATTCAGACTGCACGCCTTAAGACTTCTGGGTGCCAGCAAGCAGTCTCTTCCCCAGGAGGACCCAGATGCTGTTATGATTGACTCTCCAAAGCAAAGTGATGACTCTGTTGCCATGAAGCAATTTAAATCACCCACCAAGGAAATCTGTAGCCCTTCGGATGCTGACGATACTAAAGCACTAATTGGATCCAGTCCATGCCCACAGCTGGTGAATGTATCGGGACCCCTTGATCATTCCTCACCGAAGCGGCAATGGGACAGACTATACCCAGATATGCCACAGTCAAGCACGTGCCTAGCCCGTGCCAGATCAAGAGAGAGCATCTGCAGTATGAGAAGAGCCTCTTCAGTTCATGACATCGAGGGCTTCAGCTCCAACTCAAAGAATGTTTTCAGGGACCGACATGCGAGTGAAGACAATGGTCGCAATATCAaagGGCCATTCAACCATATAAAATCAAGTCTGCTGGGTTCTACATCAGATTCAAACCTCAACAAGTACAGCACTATCAACAAAATCCCTCAGATTACATTGAACTTTTCAGACGTTAAAAATGAGAAGAAGGCAgcttctcctccttcctctgaGAAAACGATTATTGCACCAAAGGTCAAAGACAGAACCCACAACGTCACAGAAAAAGTTACACAGGTGCTGTCACTGGGAGCAGATGTTCTGCCGGAATACAAACTCCAGACGCCACGCATCAATAAATTCACCATACTTCACTATAGTCCGTTTAAAGCAGTCTGGGACTGGCTGATTCTACTGTTAGTTATATACACGGCCATCTTTACACCATATTCGGCAGCCTTCCTGCTAAACGACCGAGAGGAACAAAAGAGACGAGAGTGTGGATATTCCTGCAACCCCTTGAATGTCGTAGACTTAATTGTGGATATTATGTTCATCATTGATATTCTCATCAACTTCAGAACAACCTATGTCAACCTTAACGAGGAGGTGGTCAGCGACCCGGCAAAAATAGCTATTCACTACTTCAAGGGCTGGTTCCTAATCGATATGACAACGACTTTGATTGGACTCTTGAAAACAGCCAGGCTGCTGCGACTAGTGCGAGTTGCCCGTAAGCTGGACCGCTACTCTGAATATGGTGCTGCTGTCCTGATGCTGCTAATGTGCATTTTTGCTTTGATTGCACACTGGCTTGCTTGCATTTGGTACGCCATTGGGAATGTGGAAAGGCCTTACCTGATCCATAAAATCGGCTGGCTCGATTCTCTGGGGATACAGATTGGGAAGCGGTACAATTACAGCGATGCCAGTTCAGGACCCTCCATAAAGGATAAATATGTGACTGCACTTTACTTTACCTTCAGCAGTCTGACAAGTGTTGGCTTTGGCAATGTGTCTCCAAATACCAACTCGGAAAAAATATTCTCCATATGCGTCATGCTGATTGGCTCACTGATGTACGCCAGTATTTTTGGGAATGTCTCTGCCATTATACAGAGACTGTACTCCGGCACAGCAAGGTACCACATGCAGATGCTTCGTGTGAAAGAATTTATACGATTCCATCAGATTCCCAACCCTCTACGGCAGAGACTCGAGGAATATTTCCAGCATGCCTGGACATACACTAATGGCATCGACATGAACATGGTCTTGAAGGGGTTTCCAGAATGTCTGCAGGCCGACATTTGCCTTCACCTCAACCAGACTTTGCTGCAGCACTGCAAGGCTTTCAGAGGAGCTACCAAAGGCTGTCTGCGGGCGCTGGCCATGAGGTTCAAGACAACACACGCTCCTCCCGGAGACACTCTCGTCCACGGTGGCGATGTTCTAACAGCGCTCTACTTCCTGTCCCGAGGCTCAATCGAAATCCTAAAGGATGACATTGTTGTAGCAATACTCGgaAAAAATGACATCTTTGGAGAAATGATTCACCTCTACGCAAAACCTGGAAAGTCTAATGCAGACGTGAGAGCATTAACTTACTGTGACCTTCATAAAATTCAAAGAGAAGATCTCCTGGAAGTACTTGATATGTATCCAGAGTTTGCTGACCACTTTCTAACCAATTTAGAGCTCACATTCAACCTTAGAGACGACAATGCAAAGaCAGACTACTCCCAATCAACAGATTCTGATGGGGAAGAGGTTAAAACTAGCAGAAGAAAGATTTCATTTAAACGCAGAACAGATATTGGAGGAAATCACGAAGAGAAAGACAATTACACAATCAAAGAGAACCTGTCTCATTCCCAGTGTGCAACGAAAGaatcagaagaaagaaaagatggTTCATTATCGTTCTCCAACTCTAGAGATGAAGAACAGAAACCATTGTGTTCTGGGGTCATAGGTTATCCTTCCATAATGGACCACACACCTGGACTTGCATTCGTTGAGAGAAGCGAGAACAAACCCAGGGACAAGTTGCAACAGAGTGAGTCTTACAAAGATCTCCGGTGTGAAGAATGGGGCTGCGAGAAGCCGAAGGACTATCCAGATGAGTCAGCACAATCTCAAGTTGCAAGAGGCATCTCAGAAACAGAAAGTGAAATGACGTATGGGGAAGTGGAGCACAGGTTAGACTTGCTTCAGGAGCAGCTAAATAGACTAGAATCGCAGATGACTTCTGACATTCAGACcatcctgcagctgctgcagaggcagACCACTTTAGGGCCCCCTGCCTACAGCACGGTGACGGCCAGCTCTGAGTACCACCGGCCGGCCATCCGAGTGCAGCCCATAGCTGCTCTAAAAACAGACAGGAGCTTCAGTCCGTCATCTCAGAGTCCAGAATTCCTAGACTTGGAAAAGCCCAACCTAAAATCCAAAGAATCCTTGTCCAGCGGGGTCCAACTGAACACAGCATCGGAGGAGAACTTGGCCTCCCTCCTGGAGCAAGAGACGGAACAGGAACAGGAGACGGGACATGACCGCGACCACACGGCGCCCTTCTATCAGCATCAGTCCAAAACCTTCCTTCTTCCAATCCGACACCCTTCCCTGCCAGATTCTTCCCTAAGCGACATAGGCATGTTGGGACTCCACAGGCATGTTTCCGATCCTGGTCTTCCCGGGAAC

Function

GO: NA

KEGG:

id description
K04910 KCNH7, KV11.3; potassium voltage-gated channel Eag-related subfamily H member 7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU160019 lncRNA downstream 3476 10757870 ~ 10759494 (-) True G127631
TU159952 lncRNA downstream 146743 10615930 ~ 10616227 (-) True G127573
TU159927 lncRNA downstream 196321 10564927 ~ 10566649 (-) True G127555
TU159830 lncRNA downstream 367044 10391304 ~ 10395926 (-) True G127478
TU159757 lncRNA downstream 612036 10147775 ~ 10150934 (-) True G127420
TU160081 lncRNA upstream 400720 11208541 ~ 11247944 (-) True G127678
TU160125 lncRNA upstream 588889 11396710 ~ 11407860 (-) True G127718
TU160154 lncRNA upstream 797983 11605804 ~ 11606176 (-) True G127740
TU160156 lncRNA upstream 801450 11609271 ~ 11609630 (-) True G127742
TU160157 lncRNA upstream 802422 11610243 ~ 11611612 (-) True G127743
AMCG00000963 mRNA downstream 10902 10749030 ~ 10752068 (-) True AMCG00000963
AMCG00000962 mRNA downstream 25694 10725849 ~ 10737276 (-) True AMCG00000962
AMCG00000961 mRNA downstream 39088 10702960 ~ 10723882 (-) True AMCG00000961
AMCG00000960 mRNA downstream 62606 10696856 ~ 10700364 (-) True AMCG00000960
AMCG00000956 mRNA downstream 248713 10489430 ~ 10514257 (-) True AMCG00000956
AMCG00000965 mRNA upstream 32292 10840113 ~ 10841698 (-) True AMCG00000965
AMCG00000968 mRNA upstream 123731 10931552 ~ 10933795 (-) True AMCG00000968
AMCG00000970 mRNA upstream 269291 11077112 ~ 11100449 (-) True AMCG00000970
AMCG00000969 mRNA upstream 327903 11135724 ~ 11155356 (-) True AMCG00000969
AMCG00000971 mRNA upstream 374111 11181932 ~ 11190201 (-) True AMCG00000971
TU159975 other downstream 62622 10697707 ~ 10700348 (-) False AMCG00000960
TU159787 other downstream 484759 10274687 ~ 10278211 (-) True G127443
TU159607 other downstream 1343645 9418996 ~ 9419325 (-) True G127292
TU159288 other downstream 3117248 7629915 ~ 7645722 (-) True G127039
TU159187 other downstream 4029153 6711958 ~ 6733817 (-) False AMCG00000888
TU160686 other upstream 1924363 12732184 ~ 12751516 (-) True G128160
TU160833 other upstream 2549162 13356983 ~ 13359770 (-) True AMCG00001061
TU161258 other upstream 3784878 14592699 ~ 14598570 (-) True G128628
TU161398 other upstream 4371420 15179241 ~ 15180322 (-) True G128741
TU161519 other upstream 4556246 15364067 ~ 15433469 (-) True AMCG00001118

Expression Profile