Item | Value |
---|---|
RNA id | AMCG00000980 |
length | 11664 |
RNA type | mRNA |
GC content | 0.40 |
exon number | 3 |
gene id | AMCG00000980 |
representative | True |
Item | Value |
---|---|
chromosome id | CM030137.1 |
NCBI id | CM030137.1 |
chromosome length | 27060302 |
location | 11396887 ~ 11410209 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
species | bowfin (Amia calva) |
id | name | namespace |
---|---|---|
GO:0009123 | nucleoside monophosphate metabolic process | biological_process |
GO:0009124 | nucleoside monophosphate biosynthetic process | biological_process |
GO:0009126 | purine nucleoside monophosphate metabolic process | biological_process |
GO:0009127 | purine nucleoside monophosphate biosynthetic process | biological_process |
GO:0009156 | ribonucleoside monophosphate biosynthetic process | biological_process |
GO:0009161 | ribonucleoside monophosphate metabolic process | biological_process |
GO:0009167 | purine ribonucleoside monophosphate metabolic process | biological_process |
GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | biological_process |
GO:1990351 | transporter complex | cellular_component |
GO:0034702 | ion channel complex | cellular_component |
GO:0034703 | cation channel complex | cellular_component |
GO:0034704 | calcium channel complex | cellular_component |
GO:0005891 | voltage-gated calcium channel complex | cellular_component |
GO:1902495 | transmembrane transporter complex | cellular_component |
id | description |
---|---|
ko04020 | Calcium signaling pathway |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU159869 | lncRNA | upstream | 951950 | 10442993 ~ 10444937 (+) | True | G127509 |
TU159589 | lncRNA | upstream | 2019298 | 9363107 ~ 9377589 (+) | True | G127278 |
TU159484 | lncRNA | upstream | 2314006 | 9081327 ~ 9082881 (+) | True | G127206 |
TU159408 | lncRNA | upstream | 2757064 | 8638596 ~ 8639823 (+) | True | G127144 |
TU159357 | lncRNA | upstream | 3102014 | 8294518 ~ 8294873 (+) | True | G127096 |
TU160196 | lncRNA | downstream | 261559 | 11671768 ~ 11742750 (+) | True | G127774 |
TU160371 | lncRNA | downstream | 683932 | 12094141 ~ 12096863 (+) | True | G127924 |
TU160510 | lncRNA | downstream | 950706 | 12360915 ~ 12362152 (+) | False | AMCG00001022 |
TU160511 | lncRNA | downstream | 950706 | 12360915 ~ 12362152 (+) | False | AMCG00001022 |
TU160571 | lncRNA | downstream | 1129872 | 12540081 ~ 12540318 (+) | True | G128074 |
AMCG00000986 | mRNA | upstream | 3555 | 11378983 ~ 11393332 (+) | True | AMCG00000986 |
AMCG00000972 | mRNA | upstream | 93763 | 11286495 ~ 11303124 (+) | True | AMCG00000972 |
AMCG00000973 | mRNA | upstream | 113206 | 11259400 ~ 11283681 (+) | True | AMCG00000973 |
AMCG00000976 | mRNA | upstream | 143664 | 11242598 ~ 11253223 (+) | True | AMCG00000976 |
AMCG00000974 | mRNA | upstream | 154504 | 11213271 ~ 11242383 (+) | True | AMCG00000974 |
AMCG00000989 | mRNA | downstream | 98539 | 11508748 ~ 11509983 (+) | True | AMCG00000989 |
AMCG00000981 | mRNA | downstream | 148532 | 11558741 ~ 11597550 (+) | True | AMCG00000981 |
AMCG00000982 | mRNA | downstream | 190059 | 11600268 ~ 11611654 (+) | True | AMCG00000982 |
AMCG00000984 | mRNA | downstream | 210049 | 11620258 ~ 11622636 (+) | True | AMCG00000984 |
AMCG00000985 | mRNA | downstream | 246444 | 11656653 ~ 11662646 (+) | True | AMCG00000985 |
TU159756 | other | upstream | 1242700 | 10147857 ~ 10154187 (+) | False | AMCG00000949 |
TU159397 | other | upstream | 2776692 | 8617199 ~ 8620195 (+) | True | G127134 |
TU157662 | other | upstream | 9700640 | 1668845 ~ 1696247 (+) | True | AMCG00000729 |
TU157655 | other | upstream | 9796248 | 1599696 ~ 1600639 (+) | False | AMCG00000723 |
TU157377 | other | upstream | 11055116 | 339640 ~ 341771 (+) | False | G125561 |
TU160309 | other | downstream | 589455 | 11999664 ~ 12011425 (+) | True | AMCG00001002 |
TU161370 | other | downstream | 3759702 | 15169911 ~ 15174147 (+) | True | AMCG00001098 |
TU161504 | other | downstream | 3998903 | 15409112 ~ 15420880 (+) | False | G128823 |
TU162207 | other | downstream | 6612851 | 18023060 ~ 18044251 (+) | True | G129365 |
TU162326 | other | downstream | 7135684 | 18545893 ~ 18547915 (+) | True | G129453 |