RNA id: AMCG00000984


Basic Information

Item Value
RNA id AMCG00000984
length 972
RNA type mRNA
GC content 0.44
exon number 5
gene id AMCG00000984
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 11620258 ~ 11622636 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGATTTGATTCACAGTAACGGAGTGCTAGTCATTCAGCACCTGCAGAATAACTACAGGGACTACCATCATTTCCTCAACTTCATGTCTTCTGTGGGGGACCCTCGCAACATCTTCTCAGTTTATTTCCCTCTGTGGTTCCAGCTTAACCAAATTGTCGGTACCAAGATGATATGGGTGGCTGTGATTGGAGACTGGTTCAATCTAATATTTAAATGgATTTTATTTGGTCATCGACCTTATTGGTGGGTGCAGGAAACTCAGTTTTATCAGAACAATTCACTGCCTCAACTTGAACAGTTCGACATCACCTGCGAAACTGGGCCAGgcaGCCCTTCTGGCCATGCCATGGGGTCTTCGTGTGTATGGTATGTGATGGTCACCTCAGCCATCGGCTTCACAAGACCTCACAGCAACAACTCTCCTCACAAAGTACAGAGATTTCGAATTGCATGGTCCTTTCTTTGGACAGCTTTCTGGGTTGTACAGATAAGCGTCTGTATCTCCAGGGTTTTTATTGCCACACACTTCCCTCATCAAGTCATTCTTGGGGTATTAGCAGGCTTTTACCTGGTCCTTAAAACGATTGACATTGATCTTCTGTGGTCAGTTCCTAAAGCCAAAAAGTGGTGTGCTAATCCAGACTGGATTGATATAGACACTACCCCATTTGCTGGACTTGTCCGAAATCTAGGGGCCCTGTTTGGGCTTGGCCTTGCCATAAACTCACAAATGTTCCTTCAGAGCTGCAAAGGGAAAAATGCCTACAACGCAAGTTTTAAACTGATGTGCATTACAACTACACTGACAACTCTGCATCTGTATGATTTCATAAAGATACCTACACACACTGAGCTACTCTTTTACGCTCTGTCGTTCTGTAAAAGTGCAGTCATTCCACTTACTGTTGTCGCACTTGTGCCATACTGCATTCACGTGGTAATGGGAGACAGTGATAAgaaattagattaa

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K01084 G6PC; glucose-6-phosphatase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU159869 lncRNA upstream 1175321 10442993 ~ 10444937 (+) True G127509
TU159589 lncRNA upstream 2242669 9363107 ~ 9377589 (+) True G127278
TU159484 lncRNA upstream 2537377 9081327 ~ 9082881 (+) True G127206
TU159408 lncRNA upstream 2980435 8638596 ~ 8639823 (+) True G127144
TU159357 lncRNA upstream 3325385 8294518 ~ 8294873 (+) True G127096
TU160196 lncRNA downstream 49132 11671768 ~ 11742750 (+) True G127774
TU160371 lncRNA downstream 471505 12094141 ~ 12096863 (+) True G127924
TU160510 lncRNA downstream 738279 12360915 ~ 12362152 (+) False AMCG00001022
TU160511 lncRNA downstream 738279 12360915 ~ 12362152 (+) False AMCG00001022
TU160571 lncRNA downstream 917445 12540081 ~ 12540318 (+) True G128074
AMCG00000982 mRNA upstream 8604 11600268 ~ 11611654 (+) True AMCG00000982
AMCG00000981 mRNA upstream 22708 11558741 ~ 11597550 (+) True AMCG00000981
AMCG00000989 mRNA upstream 110275 11508748 ~ 11509983 (+) True AMCG00000989
AMCG00000980 mRNA upstream 210049 11396887 ~ 11410209 (+) True AMCG00000980
AMCG00000986 mRNA upstream 226926 11378983 ~ 11393332 (+) True AMCG00000986
AMCG00000985 mRNA downstream 34017 11656653 ~ 11662646 (+) True AMCG00000985
AMCG00000983 mRNA downstream 45934 11668570 ~ 11675059 (+) True AMCG00000983
AMCG00000990 mRNA downstream 114833 11737469 ~ 11740984 (+) True AMCG00000990
AMCG00000996 mRNA downstream 123523 11746159 ~ 11784742 (+) True AMCG00000996
AMCG00000997 mRNA downstream 163906 11786542 ~ 11795450 (+) True AMCG00000997
TU159756 other upstream 1466071 10147857 ~ 10154187 (+) False AMCG00000949
TU159397 other upstream 3000063 8617199 ~ 8620195 (+) True G127134
TU157662 other upstream 9924011 1668845 ~ 1696247 (+) True AMCG00000729
TU157655 other upstream 10019619 1599696 ~ 1600639 (+) False AMCG00000723
TU157377 other upstream 11278487 339640 ~ 341771 (+) False G125561
TU160309 other downstream 377028 11999664 ~ 12011425 (+) True AMCG00001002
TU161370 other downstream 3547275 15169911 ~ 15174147 (+) True AMCG00001098
TU161504 other downstream 3786476 15409112 ~ 15420880 (+) False G128823
TU162207 other downstream 6400424 18023060 ~ 18044251 (+) True G129365
TU162326 other downstream 6923257 18545893 ~ 18547915 (+) True G129453

Expression Profile