RNA id: AMCG00000986



Basic Information


Item Value
RNA id AMCG00000986
length 513
RNA type mRNA
GC content 0.51
exon number 4
gene id AMCG00000986
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 11378983 ~ 11393332 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGAGCAGAAAGACCACCAATCAGCTGAGGACAGAATGTCCCTAAAACCAAGCCTGGGCACCAGTGAATCTGCTGGAGGCGCGGACAAGTCAGGGGCAGGAGTTGCTGAGGATCCTGCTAATCAGAAGAACAGCGCTCTGCTGGACAGCAACGAGACTGTTTCACTGAAGGAGAGGTTGGCCATGTATCAGGCAGCAGTCTCCAAAAAGGAGGCCGCCAGCACCTCCAGCACAGCTGTGGAGGAGTCTGAAGCCTGCACTTTGCCTGGAGGGCTAGCCAGCGTGAAGAAACAATTTGAGAGCCAGGAAATTGCATCTTCGCACAGCACAGTCACCCAATACCATTACCAGCACAAATCTGTACAGGAAGTGTCAAGTACCTCTGAGGTTACAGTGAAGAGTAGTACCGGGGCAGAACTAAGAGAAAATGTTCCATCAGCACACCAGGTGTCATTTGTTCAAGATGAAAAGGTAAAGCTTGCAACAGAAGGAGTGGACAGAACTGTAAAGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU159869 lncRNA upstream 934046 10442993 ~ 10444937 (+) True G127509
TU159589 lncRNA upstream 2001394 9363107 ~ 9377589 (+) True G127278
TU159484 lncRNA upstream 2296102 9081327 ~ 9082881 (+) True G127206
TU159408 lncRNA upstream 2739160 8638596 ~ 8639823 (+) True G127144
TU159357 lncRNA upstream 3084110 8294518 ~ 8294873 (+) True G127096
TU160196 lncRNA downstream 278436 11671768 ~ 11742750 (+) True G127774
TU160371 lncRNA downstream 700809 12094141 ~ 12096863 (+) True G127924
TU160510 lncRNA downstream 967583 12360915 ~ 12362152 (+) False AMCG00001022
TU160511 lncRNA downstream 967583 12360915 ~ 12362152 (+) False AMCG00001022
TU160571 lncRNA downstream 1146749 12540081 ~ 12540318 (+) True G128074
AMCG00000972 mRNA upstream 75859 11286495 ~ 11303124 (+) True AMCG00000972
AMCG00000973 mRNA upstream 95302 11259400 ~ 11283681 (+) True AMCG00000973
AMCG00000976 mRNA upstream 125760 11242598 ~ 11253223 (+) True AMCG00000976
AMCG00000974 mRNA upstream 136600 11213271 ~ 11242383 (+) True AMCG00000974
AMCG00000975 mRNA upstream 165944 11211761 ~ 11213039 (+) True AMCG00000975
AMCG00000980 mRNA downstream 3555 11396887 ~ 11410209 (+) True AMCG00000980
AMCG00000989 mRNA downstream 115416 11508748 ~ 11509983 (+) True AMCG00000989
AMCG00000981 mRNA downstream 165409 11558741 ~ 11597550 (+) True AMCG00000981
AMCG00000982 mRNA downstream 206936 11600268 ~ 11611654 (+) True AMCG00000982
AMCG00000984 mRNA downstream 226926 11620258 ~ 11622636 (+) True AMCG00000984
TU159756 other upstream 1224796 10147857 ~ 10154187 (+) False AMCG00000949
TU159397 other upstream 2758788 8617199 ~ 8620195 (+) True G127134
TU157662 other upstream 9682736 1668845 ~ 1696247 (+) True AMCG00000729
TU157655 other upstream 9778344 1599696 ~ 1600639 (+) False AMCG00000723
TU157377 other upstream 11037212 339640 ~ 341771 (+) False G125561
TU160309 other downstream 606332 11999664 ~ 12011425 (+) True AMCG00001002
TU161370 other downstream 3776579 15169911 ~ 15174147 (+) True AMCG00001098
TU161504 other downstream 4015780 15409112 ~ 15420880 (+) False G128823
TU162207 other downstream 6629728 18023060 ~ 18044251 (+) True G129365
TU162326 other downstream 7152561 18545893 ~ 18547915 (+) True G129453

Expression Profile