Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00001047 |
| length | 954 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 1 |
| gene id | AMCG00001047 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 12812414 ~ 12813367 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| ko04612 | Antigen processing and presentation |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU160610 | lncRNA | upstream | 136240 | 12638985 ~ 12676174 (+) | True | G128107 |
| TU160600 | lncRNA | upstream | 157242 | 12606039 ~ 12655172 (+) | True | G128101 |
| TU160612 | lncRNA | upstream | 172526 | 12638985 ~ 12639888 (+) | False | G128107 |
| TU160571 | lncRNA | upstream | 272096 | 12540081 ~ 12540318 (+) | True | G128074 |
| TU160510 | lncRNA | upstream | 450262 | 12360915 ~ 12362152 (+) | False | AMCG00001022 |
| TU160703 | lncRNA | downstream | 24284 | 12837651 ~ 12841008 (+) | False | G128171 |
| TU160704 | lncRNA | downstream | 24284 | 12837651 ~ 12841008 (+) | True | G128171 |
| TU160823 | lncRNA | downstream | 544124 | 13357491 ~ 13382644 (+) | False | G128255 |
| TU160825 | lncRNA | downstream | 544124 | 13357491 ~ 13359738 (+) | True | G128255 |
| TU160870 | lncRNA | downstream | 648299 | 13461666 ~ 13463482 (+) | True | G128294 |
| AMCG00001037 | mRNA | upstream | 104631 | 12697219 ~ 12707783 (+) | True | AMCG00001037 |
| AMCG00001036 | mRNA | upstream | 121758 | 12688778 ~ 12690656 (+) | True | AMCG00001036 |
| AMCG00001025 | mRNA | upstream | 276348 | 12529789 ~ 12536066 (+) | True | AMCG00001025 |
| AMCG00001028 | mRNA | upstream | 283310 | 12523818 ~ 12529104 (+) | True | AMCG00001028 |
| AMCG00001027 | mRNA | upstream | 294462 | 12497386 ~ 12517952 (+) | True | AMCG00001027 |
| AMCG00001052 | mRNA | downstream | 183745 | 12997112 ~ 12998946 (+) | True | AMCG00001052 |
| AMCG00001050 | mRNA | downstream | 189568 | 13002935 ~ 13004035 (+) | True | AMCG00001050 |
| AMCG00001049 | mRNA | downstream | 196329 | 13009696 ~ 13023750 (+) | True | AMCG00001049 |
| AMCG00001053 | mRNA | downstream | 215676 | 13029043 ~ 13029447 (+) | True | AMCG00001053 |
| AMCG00001056 | mRNA | downstream | 230241 | 13043608 ~ 13063126 (+) | True | AMCG00001056 |
| TU160309 | other | upstream | 800989 | 11999664 ~ 12011425 (+) | True | AMCG00001002 |
| TU159756 | other | upstream | 2658227 | 10147857 ~ 10154187 (+) | False | AMCG00000949 |
| TU159397 | other | upstream | 4192219 | 8617199 ~ 8620195 (+) | True | G127134 |
| TU157662 | other | upstream | 11116167 | 1668845 ~ 1696247 (+) | True | AMCG00000729 |
| TU157655 | other | upstream | 11211775 | 1599696 ~ 1600639 (+) | False | AMCG00000723 |
| TU161370 | other | downstream | 2356544 | 15169911 ~ 15174147 (+) | True | AMCG00001098 |
| TU161504 | other | downstream | 2595745 | 15409112 ~ 15420880 (+) | False | G128823 |
| TU162207 | other | downstream | 5209693 | 18023060 ~ 18044251 (+) | True | G129365 |
| TU162326 | other | downstream | 5732526 | 18545893 ~ 18547915 (+) | True | G129453 |
| TU162312 | other | downstream | 5741784 | 18555151 ~ 18558174 (+) | False | G129442 |
