RNA id: AMCG00001075



Basic Information


Item Value
RNA id AMCG00001075
length 381
RNA type mRNA
GC content 0.49
exon number 3
gene id AMCG00001075
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 13846399 ~ 13848862 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCATTCGCTTGCACAGGAAATAAAGGCTTTTTCAAAGACTGCGTTGAGAAAGCAGTGCACCAGGGTAACAACTCTGAGTGGGAGACGAGTCATCGAGACGTGGAAAGACTGCATGGTGCAGGTGGTTGAAGAGCCCATGCAGGCGGAGGGAGCTTGCGGTTATGTTCAGGATCTCAGCCTGGACCTTCAAGTTGGAGTCATCAAGCCTTGGCTTCTGCTGGCCTCACAGGATGTTGCTCAGGACTTTGACACTTTAAAAAACTTTAAGAATGGAGTGGTGCTTGTTCACTGTAATGCTGGGGTGTCTCGCTCTGCCTCAGTAGTCATTGGATACCTGATGTCATCAGAGTTTCTGAGTTTTGAGGACGCCTTTGCTTTG

Function


GO: NA

KEGG:

id description
K14165 K14165; atypical dual specificity phosphatase

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU160870 lncRNA upstream 382917 13461666 ~ 13463482 (+) True G128294
TU160823 lncRNA upstream 463755 13357491 ~ 13382644 (+) False G128255
TU160825 lncRNA upstream 486661 13357491 ~ 13359738 (+) True G128255
TU160703 lncRNA upstream 1005391 12837651 ~ 12841008 (+) False G128171
TU161007 lncRNA downstream 235424 14084286 ~ 14084930 (+) True G128402
TU161297 lncRNA downstream 924756 14773618 ~ 14776723 (+) True G128662
TU161300 lncRNA downstream 927997 14776859 ~ 14779441 (+) True G128663
TU161347 lncRNA downstream 1222211 15071073 ~ 15073902 (+) True G128697
TU161406 lncRNA downstream 1361491 15210353 ~ 15211325 (+) True G128747
AMCG00001070 mRNA upstream 60542 13774575 ~ 13785857 (+) True AMCG00001070
AMCG00001067 mRNA upstream 326930 13514684 ~ 13519469 (+) True AMCG00001067
AMCG00001063 mRNA upstream 413299 13404815 ~ 13433100 (+) True AMCG00001063
AMCG00001062 mRNA upstream 475106 13363537 ~ 13371293 (+) True AMCG00001062
AMCG00001055 mRNA upstream 565669 13238223 ~ 13280730 (+) True AMCG00001055
AMCG00001074 mRNA downstream 76590 13925452 ~ 13935840 (+) True AMCG00001074
AMCG00001079 mRNA downstream 157445 14006307 ~ 14007332 (+) True AMCG00001079
AMCG00001078 mRNA downstream 167242 14016104 ~ 14055778 (+) True AMCG00001078
AMCG00001082 mRNA downstream 376868 14225730 ~ 14264053 (+) True AMCG00001082
AMCG00001085 mRNA downstream 479438 14328300 ~ 14333025 (+) True AMCG00001085
TU160309 other upstream 1834974 11999664 ~ 12011425 (+) True AMCG00001002
TU159756 other upstream 3692212 10147857 ~ 10154187 (+) False AMCG00000949
TU159397 other upstream 5226204 8617199 ~ 8620195 (+) True G127134
TU157662 other upstream 12150152 1668845 ~ 1696247 (+) True AMCG00000729
TU157655 other upstream 12245760 1599696 ~ 1600639 (+) False AMCG00000723
TU161370 other downstream 1321049 15169911 ~ 15174147 (+) True AMCG00001098
TU161504 other downstream 1560250 15409112 ~ 15420880 (+) False G128823
TU162207 other downstream 4174198 18023060 ~ 18044251 (+) True G129365
TU162326 other downstream 4697031 18545893 ~ 18547915 (+) True G129453
TU162312 other downstream 4706289 18555151 ~ 18558174 (+) False G129442

Expression Profile