RNA id: AMCG00001086



Basic Information


Item Value
RNA id AMCG00001086
length 1058
RNA type mRNA
GC content 0.41
exon number 4
gene id AMCG00001086
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 14619523 ~ 14623851 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CGGGGCTGCTACGTCATCAGTCTGTCAATCGGTGCCACGCGTTCACTTGAGCACTGGGCTGTAGCTGCTGACTCTCACAATGGGGTTTattgtgtcttttcttttatATCTGCAGGCCTACAGCTTACTTGTTGATCATACAGCTGCCGATGAGTCTAAGGATGAAGTCAAAATAGAAGTGTTGTACATGCCTGAGACCTGTACCCAGAAGAGCAAAAAGGGGGATATGTTGAATGCGCATTATGATGGGTACTTAGCAAAAGACGGCTCCAAGTTTTACTGTAGTCGTTCAGACAATAAGGGACATCCTAAGTGGTTTGTATTGGGAGTTGGACAAGTGATCAAGGGGCTGGATATAGGCATGGATGGAATGTGTGTTGGAGAAAAACGAAAAGTGATCATCCCTCCATCGTTAGCCTTTGGAGAAAAGGGGAAAGACAGTGTTCCACCTAATGCTACTGTGATATTTGAGATTGAGCTGTACACTGTAACAAGAGGACCCCGCAGTGTTGAGTCCTTCAGAGAAATCGACCTGGACAGAGACAGGTCCCTTTCAAAGAGTGAGGTCAGAGAATATATGAAGAAGGAGTTTGAGACCCGGGGCAGTAAGCGTGATGCCTCCTTCTATGACGCCATTGTAGCTGATGTGTTTCGTAAAAGTGATCACAATGGAGATGGCTTAATTTCTGCCAAGGAATACAATGTCTACGATCATGACGAGTTATAGCGCTGCATTACAGATTTAGTGCGCACTGATGAATTGTAAATGGTAACGTTTGCCATAAAGAATATGTAGGAGGAAATGTGAATATTCTTTCAGATGATTAACTTAATACGTTGAAGTATTGTGCGAAGACTAAAACCTTATGTCTGTGATCATtttgtcaaataaaacaataaatcatgtaaattgtttgcattgttaaaatattaagatTTTGGTTTGTCCCAGCCCTGGTGCCAAATAGATTTCAACTGCTGTGTCTTTTTAGAAACTTATTTCAAAAACAGCAGAATAGCTGTAATGCCTATGGGAACTGATTTAAGTAAAGGTTTGG

Function


GO: NA

KEGG:

id description
K09573 FKBP7; FK506-binding protein 7

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU161007 lncRNA upstream 534593 14084286 ~ 14084930 (+) True G128402
TU160870 lncRNA upstream 1156041 13461666 ~ 13463482 (+) True G128294
TU160823 lncRNA upstream 1236879 13357491 ~ 13382644 (+) False G128255
TU160825 lncRNA upstream 1259785 13357491 ~ 13359738 (+) True G128255
TU160704 lncRNA upstream 1778515 12837651 ~ 12841008 (+) True G128171
TU161297 lncRNA downstream 149767 14773618 ~ 14776723 (+) True G128662
TU161300 lncRNA downstream 153008 14776859 ~ 14779441 (+) True G128663
TU161347 lncRNA downstream 447222 15071073 ~ 15073902 (+) True G128697
TU161406 lncRNA downstream 586502 15210353 ~ 15211325 (+) True G128747
TU161435 lncRNA downstream 702143 15325994 ~ 15326220 (+) True G128772
AMCG00001088 mRNA upstream 17183 14522664 ~ 14602340 (+) True AMCG00001088
AMCG00001090 mRNA upstream 121904 14477042 ~ 14497619 (+) True AMCG00001090
AMCG00001089 mRNA upstream 146024 14404322 ~ 14473499 (+) True AMCG00001089
AMCG00001084 mRNA upstream 219764 14372427 ~ 14399759 (+) True AMCG00001084
AMCG00001083 mRNA upstream 268045 14343748 ~ 14351478 (+) True AMCG00001083
AMCG00001087 mRNA downstream 72789 14696640 ~ 14728187 (+) True AMCG00001087
AMCG00001095 mRNA downstream 374166 14998017 ~ 15035581 (+) True AMCG00001095
AMCG00001094 mRNA downstream 437150 15061001 ~ 15070971 (+) True AMCG00001094
AMCG00001098 mRNA downstream 526424 15150275 ~ 15184392 (+) False AMCG00001098
AMCG00001102 mRNA downstream 606020 15229871 ~ 15241090 (+) True AMCG00001102
TU160309 other upstream 2608098 11999664 ~ 12011425 (+) True AMCG00001002
TU159756 other upstream 4465336 10147857 ~ 10154187 (+) False AMCG00000949
TU159397 other upstream 5999328 8617199 ~ 8620195 (+) True G127134
TU157662 other upstream 12923276 1668845 ~ 1696247 (+) True AMCG00000729
TU157655 other upstream 13018884 1599696 ~ 1600639 (+) False AMCG00000723
TU161370 other downstream 546060 15169911 ~ 15174147 (+) True AMCG00001098
TU161504 other downstream 785261 15409112 ~ 15420880 (+) False G128823
TU162207 other downstream 3399209 18023060 ~ 18044251 (+) True G129365
TU162326 other downstream 3922042 18545893 ~ 18547915 (+) True G129453
TU162312 other downstream 3931300 18555151 ~ 18558174 (+) False G129442

Expression Profile