RNA id: AMCG00001095



Basic Information


Item Value
RNA id AMCG00001095
length 855
RNA type mRNA
GC content 0.50
exon number 4
gene id AMCG00001095
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 14998017 ~ 15035581 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGAGTCACTGTTTCCACTGGAGGAGACGGTGAGGCTAGGGGTCTCGGACAGACCATCTTCAGCACCGTCTTCCATTTCAGCACCATCCTCGGCCTGGGAGAGGCTCTTCTCCTGGAGGACGGGGGTGTCTCTGTTGCAGGAGCCACTGAGGCTGGGGGGCTTGGACAGTCTGGGGGTCTCCGTGTTGGTCCTGGTGTCGGGCTGCTGGTTGCGTGATCTGTACCACCACCAGGCCACGAGCACCAGCGCTGCAGGCAGCCCGAAGGGCAAGATTGAGCGAAATTTCATCTTCTCGAATGGAGAGCTGCCTGAACTGAAAATTTTCCATCAGTCCTGCGCTCTGAAGATGGATGACGGTCCATGCAAAGCAAACTTACCCAGGTTCTATTTTGACATCGAGACTCACAAGTGTGAACCATTCGATTATGGAGGCTGTGGGGGTAACGCAAACAATTTTGAAAGCTTGGgcaggtgtgaagaaatgtgTGTAGTTAAAAAGGACAAAAACCCATGCCATTTAGAGGAAGAACCAGGACCATGCCGAGGGATTGTCATTCGATATTTTTTCAACAATGCAACCCAGCAGTGTGAGCGCCTGCTTTACGGAGggtgttttggaaatgccaatAACTTCAAAACACTAAGAGAGTGCCAGGATACCTGCCATAAACAGAATTCCGACAAACCAGATTTCTGTCTAAGTTGCGCAGACCGAGGCACCTGTGATGGTTCTGTGAAAAGATACTTATATAATCCCAAGACGAACAGATGCCAGGCTTTTGTGTACAGCGGATGTGGAGGAAACCAGAATAACTTCACCTCCAAGAAGGACTGTAGAAAAACTTGCATGAAA

Function


GO: NA

KEGG:

id description
K03909 TFPI; tissue factor pathway inhibitor

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU161300 lncRNA upstream 218576 14776859 ~ 14779441 (+) True G128663
TU161297 lncRNA upstream 221294 14773618 ~ 14776723 (+) True G128662
TU161007 lncRNA upstream 913087 14084286 ~ 14084930 (+) True G128402
TU160870 lncRNA upstream 1534535 13461666 ~ 13463482 (+) True G128294
TU160823 lncRNA upstream 1615373 13357491 ~ 13382644 (+) False G128255
TU161347 lncRNA downstream 35492 15071073 ~ 15073902 (+) True G128697
TU161406 lncRNA downstream 174772 15210353 ~ 15211325 (+) True G128747
TU161435 lncRNA downstream 290413 15325994 ~ 15326220 (+) True G128772
TU161494 lncRNA downstream 323062 15358643 ~ 15359014 (+) True G128815
TU161502 lncRNA downstream 373531 15409112 ~ 15412710 (+) True G128823
AMCG00001087 mRNA upstream 269830 14696640 ~ 14728187 (+) True AMCG00001087
AMCG00001086 mRNA upstream 374166 14619523 ~ 14623851 (+) True AMCG00001086
AMCG00001088 mRNA upstream 395677 14522664 ~ 14602340 (+) True AMCG00001088
AMCG00001090 mRNA upstream 500398 14477042 ~ 14497619 (+) True AMCG00001090
AMCG00001089 mRNA upstream 524518 14404322 ~ 14473499 (+) True AMCG00001089
AMCG00001094 mRNA downstream 25420 15061001 ~ 15070971 (+) True AMCG00001094
AMCG00001098 mRNA downstream 114694 15150275 ~ 15184392 (+) False AMCG00001098
AMCG00001102 mRNA downstream 194290 15229871 ~ 15241090 (+) True AMCG00001102
AMCG00001101 mRNA downstream 226170 15261751 ~ 15264010 (+) True AMCG00001101
AMCG00001103 mRNA downstream 233671 15269252 ~ 15283103 (+) True AMCG00001103
TU160309 other upstream 2986592 11999664 ~ 12011425 (+) True AMCG00001002
TU159756 other upstream 4843830 10147857 ~ 10154187 (+) False AMCG00000949
TU159397 other upstream 6377822 8617199 ~ 8620195 (+) True G127134
TU157662 other upstream 13301770 1668845 ~ 1696247 (+) True AMCG00000729
TU157655 other upstream 13397378 1599696 ~ 1600639 (+) False AMCG00000723
TU161370 other downstream 134330 15169911 ~ 15174147 (+) True AMCG00001098
TU161504 other downstream 373531 15409112 ~ 15420880 (+) False G128823
TU162207 other downstream 2987479 18023060 ~ 18044251 (+) True G129365
TU162326 other downstream 3510312 18545893 ~ 18547915 (+) True G129453
TU162312 other downstream 3519570 18555151 ~ 18558174 (+) False G129442

Expression Profile