Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00001162 |
| length | 798 |
| RNA type | mRNA |
| GC content | 0.58 |
| exon number | 1 |
| gene id | AMCG00001162 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 17421069 ~ 17421866 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU161853 | lncRNA | upstream | 274000 | 17144190 ~ 17147069 (+) | True | G129080 |
| TU161844 | lncRNA | upstream | 528708 | 16889638 ~ 16892361 (+) | True | G129071 |
| TU161684 | lncRNA | upstream | 1358890 | 16022258 ~ 16062179 (+) | True | G128958 |
| TU161649 | lncRNA | upstream | 1496259 | 15923032 ~ 15924810 (+) | True | G128941 |
| TU161647 | lncRNA | upstream | 1499030 | 15921674 ~ 15922039 (+) | True | G128939 |
| TU162040 | lncRNA | downstream | 65526 | 17487392 ~ 17550791 (+) | True | G129221 |
| TU162082 | lncRNA | downstream | 269641 | 17691507 ~ 17692526 (+) | True | G129255 |
| TU162181 | lncRNA | downstream | 550143 | 17972009 ~ 17976936 (+) | True | G129343 |
| TU162309 | lncRNA | downstream | 1133285 | 18555151 ~ 18557104 (+) | True | G129442 |
| TU162310 | lncRNA | downstream | 1133285 | 18555151 ~ 18557104 (+) | False | G129442 |
| AMCG00001161 | mRNA | upstream | 23050 | 17384589 ~ 17398019 (+) | True | AMCG00001161 |
| AMCG00001159 | mRNA | upstream | 112483 | 17297142 ~ 17308586 (+) | True | AMCG00001159 |
| AMCG00001158 | mRNA | upstream | 124391 | 17270011 ~ 17296678 (+) | True | AMCG00001158 |
| AMCG00001154 | mRNA | upstream | 278082 | 17125328 ~ 17142987 (+) | True | AMCG00001154 |
| AMCG00001153 | mRNA | upstream | 299704 | 17051725 ~ 17121365 (+) | True | AMCG00001153 |
| AMCG00001169 | mRNA | downstream | 302382 | 17724248 ~ 17725586 (+) | True | AMCG00001169 |
| AMCG00001170 | mRNA | downstream | 325184 | 17747050 ~ 17755669 (+) | True | AMCG00001170 |
| AMCG00001168 | mRNA | downstream | 351079 | 17772945 ~ 17782621 (+) | True | AMCG00001168 |
| AMCG00001175 | mRNA | downstream | 371527 | 17793393 ~ 17804682 (+) | True | AMCG00001175 |
| AMCG00001174 | mRNA | downstream | 436486 | 17858352 ~ 17866887 (+) | True | AMCG00001174 |
| TU161504 | other | upstream | 2000189 | 15409112 ~ 15420880 (+) | False | G128823 |
| TU161370 | other | upstream | 2246922 | 15169911 ~ 15174147 (+) | True | AMCG00001098 |
| TU160309 | other | upstream | 5409644 | 11999664 ~ 12011425 (+) | True | AMCG00001002 |
| TU159756 | other | upstream | 7266882 | 10147857 ~ 10154187 (+) | False | AMCG00000949 |
| TU159397 | other | upstream | 8800874 | 8617199 ~ 8620195 (+) | True | G127134 |
| TU162207 | other | downstream | 601194 | 18023060 ~ 18044251 (+) | True | G129365 |
| TU162326 | other | downstream | 1124027 | 18545893 ~ 18547915 (+) | True | G129453 |
| TU162312 | other | downstream | 1133285 | 18555151 ~ 18558174 (+) | False | G129442 |
| TU162456 | other | downstream | 1466525 | 18888391 ~ 18889724 (+) | False | AMCG00001203 |
| TU162506 | other | downstream | 1621438 | 19043304 ~ 19142145 (+) | True | G129594 |
