RNA id: TU162350



Basic Information


Item Value
RNA id TU162350
length 320
RNA type TUCP
GC content 0.56
exon number 3
gene id AMCG00001193
representative False

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 18524733 ~ 18532689 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CAGAGGCCATGATGCACGCCTGCATCTTCAAGCTGTTGACGAACCATGAAGAGTCCCTGGAGTGCCTGTGCCGACTCCTCTCCACTATCGGCAAAGACCTCGAGACAGCCAAGCCCCGCATGGACCAGTACTTCAGCCAGATGGAGCAGATCATCAAAGAGAGGAAGACCTCCCCTCGAATCCGCTTCATGCTGCAGGACGTCTTGGACCTGAGAAGAGATAACTGGGTGCCCAGGAGGGGTGACCAGGGTCCTAAGACAATCGACCAGGTCCACAAGGAAGCAGAGCTGGAGGCGCACCATGAGCAGATCAAGGTGAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU162338 lncRNA downstream 43936 18477617 ~ 18480956 (-) True G129465
TU162305 lncRNA downstream 109782 18413485 ~ 18415110 (-) True G129440
TU162303 lncRNA downstream 111459 18412854 ~ 18413433 (-) True G129438
TU162302 lncRNA downstream 112142 18410106 ~ 18412750 (-) True G129437
TU162247 lncRNA downstream 259620 18240456 ~ 18265272 (-) True G129394
TU162463 lncRNA upstream 364401 18889944 ~ 18890146 (-) True G129567
TU162475 lncRNA upstream 374968 18900511 ~ 18903646 (-) True G129571
TU162477 lncRNA upstream 381601 18907144 ~ 18907641 (-) True G129573
TU162502 lncRNA upstream 513624 19039167 ~ 19041958 (-) True G129593
TU162540 lncRNA upstream 551207 19076750 ~ 19083163 (-) True G129621
AMCG00001194 mRNA downstream 7356 18507549 ~ 18517536 (-) True AMCG00001194
AMCG00001187 mRNA downstream 205959 18300833 ~ 18318933 (-) True AMCG00001187
AMCG00001185 mRNA downstream 288112 18173883 ~ 18236780 (-) True AMCG00001185
AMCG00001179 mRNA downstream 535276 17977837 ~ 17989616 (-) True AMCG00001179
AMCG00001176 mRNA downstream 668103 17806233 ~ 17856789 (-) True AMCG00001176
AMCG00001192 mRNA upstream 13452 18538995 ~ 18547799 (-) True AMCG00001192
AMCG00001198 mRNA upstream 23015 18548558 ~ 18553602 (-) True AMCG00001198
AMCG00001196 mRNA upstream 29692 18555235 ~ 18558151 (-) True AMCG00001196
AMCG00001199 mRNA upstream 39215 18564758 ~ 18588835 (-) True AMCG00001199
AMCG00001197 mRNA upstream 65114 18590657 ~ 18608629 (-) True AMCG00001197
TU161965 other downstream 1351215 17172870 ~ 17173677 (-) False AMCG00001156
TU161636 other downstream 2615766 15560345 ~ 15909126 (-) False AMCG00001127
TU161519 other downstream 3091423 15364067 ~ 15433469 (-) True AMCG00001118
TU161398 other downstream 3344570 15179241 ~ 15180322 (-) True G128741
TU161258 other downstream 3926322 14592699 ~ 14598570 (-) True G128628
TU162357 other upstream 30287 18555830 ~ 18558217 (-) False AMCG00001196
TU162458 other upstream 363222 18888765 ~ 18889757 (-) True G129566
TU162897 other upstream 2722118 21247661 ~ 21270383 (-) True AMCG00001251
TU162985 other upstream 3084764 21610307 ~ 21648508 (-) False AMCG00001264
TU162984 other upstream 3263665 21789208 ~ 21822820 (-) True G130004

Expression Profile