RNA id: AMCG00001316


Basic Information

Item Value
RNA id AMCG00001316
length 1368
RNA type mRNA
GC content 0.58
exon number 10
gene id AMCG00001316
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 24597569 ~ 24685570 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAGATCCTGGACACAGAAGCTGGGGCTCCCGGAGGCACAAAGGTTAAACTTCATTGGCGTGACACTAGAGAAGGACAGACGCTACATTCACTTCACCTCCAGCAAGCACACTTTTGCCCCTGTCGCAATCGGTAGCTTCAGCCCTCCAAAACAGGTTGTGCAGATACATCCAGAGAGTGGAGAGCTGGCTGCAGCGGAAAGCTCTCACTGTGTCATCACCCTTCACGCCTCTGGGAGCCCCAGCTTCTGTGTCCAGGATCTCATCTGTCAGGTGACCACAGGAGGCGCCCTGACACAGTACAGATCAGAACTGCAGCAGTgggagctggagaaggagagacagaagAATGAGTTCACTGTGATGGACAGAGACACCAAGCCCTCTACGCAGCCCAAGGTAGGAGTTGAGGGTCTCCAGGGAGAAGAGACTCCAGAGCTGCAGTTTGCTGATGCCCTCAATACTGCCGGAGCTGCGCGCATCGCTAACAGTGAGCATGGGGTACACGCCTTGTGCATTCACCTGGCACAGGCTCTGAGCCCCTGCTATCACCTGCCCTGGGGGGCCACAAACCGAATTGGGGTCAGTCCCGATCACAACACAGTTAAAAGTCTCATGGATGACCCTCAGTTCCATCAGTCCCTGCTGAACAGCCTGACTGAGCCGGTGCCCTATTTCTCCCAGCTAAAGAGCCCACAGTCTTCTAGGCTGCCATCGCGGCAGGATCAAGCTGAAGAGGGCGCTGGCTCTGCACTTTCCTCTCCCACGCCCCAGACACCTGTCAGGAGGGACCTGTCCAGTACAGTGTTGGGGGAGCCGGGGCCCTGGGAGGTCGATCCTCAGGGTTTCAAACCGCACGAGAAGCAGCCGGAGGTGCGGGAGGCCATTAAGAGACATGCCCAGCTGTGGTCTTCTGGTGACCAGAGCTCGGAGCCAGTCAGAGGCCAAGTGATAGCAGGGGCTCAGAGCCTGTGCCAGGTGAATGCACAGGGTGTTTACCCCATGCTCACTGTCAGCGATGCGCGCAGCTCCGGCAGTGTTGAGGGCATCAGCAAACTGCAGCTCTGGAACCTCTTCTCCCTGGAGACCCTCAACTCCTACCTGCAGAGAGACCCCACTCCCACAGAGCTCACCTACAGAGTGCCCACCCGACACAGGAGTTTTCCTCAGAGTGAAGATCTGTTGATCCTGAAGGCAGAGGTCTTCAGAGGAGGGAGGTCACAGGTCAGGGGGGTCACACTGAAGGGGCTCCCCACAAGACTGGTCCAGATGATCGTCAGCCTTCCCTTGGTGTGGTTGGTCAAGGAGAGGGGGCGGGAGCATGGGCCGTTGTGGAAGAGGATCTCCGGGGGGTCAAGGGTCACGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU163729 lncRNA downstream 18611 24576974 ~ 24578958 (-) True G130633
TU163699 lncRNA downstream 177963 24414103 ~ 24419606 (-) False AMCG00001303
TU163692 lncRNA downstream 197033 24394526 ~ 24400536 (-) True AMCG00001306
TU163667 lncRNA downstream 243328 24330250 ~ 24354241 (-) True G130591
TU163646 lncRNA downstream 403165 24190999 ~ 24194404 (-) False G130574
TU163744 lncRNA upstream 21698 24694808 ~ 24695031 (-) True G130646
TU163774 lncRNA upstream 241611 24914721 ~ 24914981 (-) True G130671
TU163781 lncRNA upstream 300769 24973879 ~ 24974084 (-) True G130678
TU163789 lncRNA upstream 351678 25024788 ~ 25025012 (-) True G130686
TU163793 lncRNA upstream 383511 25056621 ~ 25056920 (-) True G130690
AMCG00001305 mRNA downstream 126490 24439406 ~ 24471079 (-) True AMCG00001305
AMCG00001307 mRNA downstream 160870 24422147 ~ 24436699 (-) True AMCG00001307
AMCG00001303 mRNA downstream 177963 24404787 ~ 24419606 (-) False AMCG00001303
AMCG00001306 mRNA downstream 197023 24399779 ~ 24400546 (-) False AMCG00001306
AMCG00001308 mRNA downstream 214758 24375904 ~ 24382811 (-) True AMCG00001308
AMCG00001318 mRNA upstream 43427 24716537 ~ 24717056 (-) True AMCG00001318
AMCG00001320 mRNA upstream 132895 24806005 ~ 24865316 (-) True AMCG00001320
AMCG00001321 mRNA upstream 309471 24982581 ~ 25010615 (-) True AMCG00001321
AMCG00001323 mRNA upstream 545992 25219102 ~ 25223511 (-) True AMCG00001323
AMCG00001326 mRNA upstream 570535 25243645 ~ 25246650 (-) True AMCG00001326
TU163711 other downstream 157920 24435089 ~ 24439649 (-) True G130622
TU163698 other downstream 177963 24404790 ~ 24419606 (-) True AMCG00001303
TU163521 other downstream 872290 23723392 ~ 23725279 (-) True G130470
TU163259 other downstream 1983283 22611486 ~ 22614286 (-) False G130244
TU163107 other downstream 2295121 22259443 ~ 22302448 (-) True AMCG00001270
TU163769 other upstream 153183 24826293 ~ 24836873 (-) True G130667
TU163842 other upstream 549786 25222896 ~ 25224928 (-) True G130735
TU163843 other upstream 549786 25222896 ~ 25246452 (-) False G130735
TU163851 other upstream 602692 25275802 ~ 25277397 (-) False AMCG00001327
TU163889 other upstream 716117 25389227 ~ 25413847 (-) True G130767

Expression Profile