RNA id: AMCG00001343



Basic Information


Item Value
RNA id AMCG00001343
length 195
RNA type mRNA
GC content 0.51
exon number 3
gene id AMCG00001343
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 25801897 ~ 25815797 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTATAAAGTCTGCTACTGTAACGAACAGTACCGCAGCACAGTGTTGTGGGACCGATTGTGGCCTATCACTCCCGTTACCTGGTCCGGTAACCTCAAGACTGTTCAAAGGACCAGCAGTGCCAGGGCTTTGAGATACGGACAGGGAAGCTTCAGCGACTTGcgAGTAAAACATTTCAACTCCCGGGATGAGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU163905 lncRNA downstream 350823 25449256 ~ 25451074 (-) True G130781
TU163902 lncRNA downstream 361071 25437645 ~ 25440826 (-) True G130778
TU163900 lncRNA downstream 366778 25434916 ~ 25435119 (-) True G130777
TU163898 lncRNA downstream 370230 25431443 ~ 25431667 (-) True G130775
TU163892 lncRNA downstream 380553 25421029 ~ 25421344 (-) True G130769
TU164065 lncRNA upstream 310014 26125811 ~ 26132592 (-) True G130921
TU164092 lncRNA upstream 472751 26288548 ~ 26293255 (-) True G130944
TU164143 lncRNA upstream 671396 26487193 ~ 26487686 (-) True G130980
TU164183 lncRNA upstream 814439 26630236 ~ 26630628 (-) True G131015
TU164184 lncRNA upstream 840214 26656011 ~ 26656252 (-) True G131016
AMCG00001345 mRNA downstream 516 25777432 ~ 25801381 (-) True AMCG00001345
AMCG00001342 mRNA downstream 39491 25750342 ~ 25762406 (-) True AMCG00001342
AMCG00001339 mRNA downstream 67855 25727383 ~ 25734042 (-) True AMCG00001339
AMCG00001340 mRNA downstream 85828 25708851 ~ 25716069 (-) True AMCG00001340
AMCG00001341 mRNA downstream 94221 25675568 ~ 25707676 (-) True AMCG00001341
AMCG00001344 mRNA upstream 41 25815838 ~ 25817520 (-) True AMCG00001344
AMCG00001346 mRNA upstream 143276 25959073 ~ 25992808 (-) True AMCG00001346
AMCG00001354 mRNA upstream 483936 26299733 ~ 26360373 (-) True AMCG00001354
AMCG00001358 mRNA upstream 683496 26499293 ~ 26499996 (-) True AMCG00001358
AMCG00001359 mRNA upstream 714072 26529869 ~ 26536285 (-) True AMCG00001359
TU163903 other downstream 359266 25441613 ~ 25442631 (-) True G130779
TU163894 other downstream 378543 25421924 ~ 25423354 (-) True G130771
TU163889 other downstream 388050 25389227 ~ 25413847 (-) True G130767
TU163851 other downstream 524500 25275802 ~ 25277397 (-) False AMCG00001327
TU163843 other downstream 555445 25222896 ~ 25246452 (-) False G130735

Expression Profile