RNA id: TU157281


Basic Information

Item Value
RNA id TU157281
length 235
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G125497
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 91051 ~ 91285 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

NNNATTTTCATGATCAAACACAAGCCATTCACGACCCGTCAGCCATTTGgcattacaatttattttcttcgTTTCTCTGTCTTCATCCCCTGGCTCGTTCCTCTTCTCGCCCCCAGAAGTCTGTCCCAACCACCGCCGCATTTAGTTCAatctttactttactttactagCTAACTCGCTGCTCTTTCAGCTTCCGGCTCCGTTCGCTCTTATTCTTCCTCCGTTCGTTTCCATG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU157282 lncRNA upstream 998 92283 ~ 92655 (-) True G125498
TU157307 lncRNA upstream 29995 121280 ~ 124274 (-) False G125515
TU157308 lncRNA upstream 29995 121280 ~ 127663 (-) True G125515
TU157403 lncRNA upstream 284535 375820 ~ 376770 (-) True G125578
TU157417 lncRNA upstream 318330 409615 ~ 410817 (-) True G125591
AMCG00000685 mRNA downstream 806 87659 ~ 90245 (-) True AMCG00000685
AMCG00000682 mRNA downstream 14715 66652 ~ 76336 (-) True AMCG00000682
AMCG00000684 mRNA upstream 8784 100069 ~ 110524 (-) True AMCG00000684
AMCG00000686 mRNA upstream 20877 112162 ~ 119898 (-) True AMCG00000686
AMCG00000689 mRNA upstream 40348 131633 ~ 142509 (-) True AMCG00000689
AMCG00000688 mRNA upstream 54494 145779 ~ 192328 (-) True AMCG00000688
AMCG00000687 mRNA upstream 107731 199016 ~ 244177 (-) True AMCG00000687
TU157359 other upstream 103359 194644 ~ 213612 (-) False AMCG00000687
TU157704 other upstream 1295558 1386843 ~ 1422410 (-) True G125814
TU157731 other upstream 1402697 1493982 ~ 1500661 (-) False AMCG00000719
TU157772 other upstream 1670977 1762262 ~ 1767476 (-) False AMCG00000731
TU157782 other upstream 1738262 1829547 ~ 1831310 (-) True AMCG00000741

Expression Profile