RNA id: TU158015


Basic Information

Item Value
RNA id TU158015
length 259
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G126037
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 2557991 ~ 2558249 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgagaaggttcaggtcctcagtctctcagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtccacagtatccagatgagctctaactagtgcattgtacagtctgaacatcactgcccttgttctcaattctacc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU157974 lncRNA downstream 37771 2427941 ~ 2520220 (-) True G126005
TU157998 lncRNA downstream 95503 2460715 ~ 2462488 (-) True G126020
TU157778 lncRNA downstream 730249 1822252 ~ 1827742 (-) True G125875
TU157743 lncRNA downstream 980645 1575361 ~ 1577346 (-) True G125845
TU157574 lncRNA downstream 1229343 1323503 ~ 1328648 (-) True G125719
TU158101 lncRNA upstream 575627 3133876 ~ 3135913 (-) False AMCG00000777
TU158325 lncRNA upstream 992591 3550840 ~ 3552977 (-) True G126275
TU158314 lncRNA upstream 994798 3553047 ~ 3656561 (-) True AMCG00000804
TU158357 lncRNA upstream 1116032 3674281 ~ 3676927 (-) True G126296
TU158437 lncRNA upstream 1686480 4244729 ~ 4245041 (-) True G126369
AMCG00000765 mRNA downstream 20123 2520235 ~ 2537868 (-) True AMCG00000765
AMCG00000763 mRNA downstream 158636 2394089 ~ 2399355 (-) True AMCG00000763
AMCG00000759 mRNA downstream 231386 2262668 ~ 2326605 (-) True AMCG00000759
AMCG00000755 mRNA downstream 413354 2133482 ~ 2144637 (-) True AMCG00000755
AMCG00000756 mRNA downstream 437232 2098930 ~ 2120759 (-) True AMCG00000756
AMCG00000771 mRNA upstream 485918 3044167 ~ 3050016 (-) False AMCG00000771
AMCG00000770 mRNA upstream 494632 3052881 ~ 3055879 (-) True AMCG00000770
AMCG00000775 mRNA upstream 507561 3065810 ~ 3078543 (-) True AMCG00000775
AMCG00000776 mRNA upstream 525206 3083455 ~ 3103231 (-) True AMCG00000776
AMCG00000778 mRNA upstream 563959 3122208 ~ 3123800 (-) True AMCG00000778
TU157989 other downstream 100108 2451868 ~ 2457883 (-) False G126017
TU157991 other downstream 100108 2451868 ~ 2457883 (-) True G126017
TU157993 other downstream 100108 2451868 ~ 2457883 (-) False G126017
TU157994 other downstream 100108 2451868 ~ 2457883 (-) False G126017
TU157782 other downstream 726681 1829547 ~ 1831310 (-) True AMCG00000741
TU158078 other upstream 478682 3036931 ~ 3041964 (-) True G126089
TU158081 other upstream 486008 3044257 ~ 3049951 (-) True AMCG00000771
TU158093 other upstream 573465 3131714 ~ 3133817 (-) False G126096
TU158094 other upstream 573465 3131714 ~ 3149252 (-) True G126096
TU158313 other upstream 1094408 3652657 ~ 3656561 (-) False AMCG00000804

Expression Profile