Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU158756 |
| length | 261 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G126621 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 5349982 ~ 5350242 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0002011 | morphogenesis of an epithelial sheet | biological_process |
| GO:0055113 | epiboly involved in gastrulation with mouth forming second | biological_process |
| GO:0090504 | epiboly | biological_process |
| GO:0001702 | gastrulation with mouth forming second | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU158701 | lncRNA | upstream | 217026 | 5132374 ~ 5132956 (+) | True | G126574 |
| TU158700 | lncRNA | upstream | 217991 | 5131718 ~ 5131991 (+) | True | G126573 |
| TU158698 | lncRNA | upstream | 219321 | 5128507 ~ 5130661 (+) | True | G126572 |
| TU158696 | lncRNA | upstream | 222326 | 5127314 ~ 5127656 (+) | True | G126570 |
| TU158695 | lncRNA | upstream | 223174 | 5126559 ~ 5126808 (+) | True | G126569 |
| TU158802 | lncRNA | downstream | 114609 | 5464851 ~ 5465981 (+) | False | AMCG00000848 |
| TU158805 | lncRNA | downstream | 116740 | 5466982 ~ 5467528 (+) | True | G126667 |
| TU158853 | lncRNA | downstream | 219728 | 5569970 ~ 5571932 (+) | True | G126697 |
| TU158870 | lncRNA | downstream | 369026 | 5719268 ~ 5799635 (+) | True | G126714 |
| TU158964 | lncRNA | downstream | 850667 | 6200909 ~ 6201605 (+) | True | G126781 |
| AMCG00000845 | mRNA | upstream | 17276 | 5316197 ~ 5332706 (+) | True | AMCG00000845 |
| AMCG00000844 | mRNA | upstream | 84277 | 5221997 ~ 5265705 (+) | True | AMCG00000844 |
| AMCG00000841 | mRNA | upstream | 233998 | 5081856 ~ 5115984 (+) | True | AMCG00000841 |
| AMCG00000840 | mRNA | upstream | 301898 | 5039948 ~ 5048084 (+) | True | AMCG00000840 |
| AMCG00000837 | mRNA | upstream | 315285 | 5025295 ~ 5034697 (+) | True | AMCG00000837 |
| AMCG00000849 | mRNA | downstream | 47083 | 5397325 ~ 5404570 (+) | True | AMCG00000849 |
| AMCG00000847 | mRNA | downstream | 75919 | 5426161 ~ 5441254 (+) | True | AMCG00000847 |
| AMCG00000848 | mRNA | downstream | 111059 | 5461301 ~ 5464884 (+) | True | AMCG00000848 |
| AMCG00000857 | mRNA | downstream | 122852 | 5473094 ~ 5487499 (+) | True | AMCG00000857 |
| AMCG00000855 | mRNA | downstream | 147380 | 5497622 ~ 5556669 (+) | True | AMCG00000855 |
| TU157662 | other | upstream | 3653735 | 1668845 ~ 1696247 (+) | True | AMCG00000729 |
| TU157655 | other | upstream | 3749343 | 1599696 ~ 1600639 (+) | False | AMCG00000723 |
| TU157377 | other | upstream | 5008211 | 339640 ~ 341771 (+) | False | G125561 |
| TU159397 | other | downstream | 3266957 | 8617199 ~ 8620195 (+) | True | G127134 |
| TU159756 | other | downstream | 4797615 | 10147857 ~ 10154187 (+) | False | AMCG00000949 |
| TU160309 | other | downstream | 6649422 | 11999664 ~ 12011425 (+) | True | AMCG00001002 |
| TU161370 | other | downstream | 9819669 | 15169911 ~ 15174147 (+) | True | AMCG00001098 |
| TU161504 | other | downstream | 10058870 | 15409112 ~ 15420880 (+) | False | G128823 |
