RNA id: TU159428


Basic Information

Item Value
RNA id TU159428
length 215
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G127159
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 8764113 ~ 8764392 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ggccaaaaagccataactccgatgtggcaacaaggccaagtgactcaactatgcatgaaaacacaggaactggggtgcagaaaaatggcagcaggtgctctggactgatgagtcaaaatttgaaatatctggcaacagtgaagcatggtggaggttccttgcaagtttggggctgcatttctgcaaatggagttggggatttggtcagaattaat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU159409 lncRNA downstream 124230 8638596 ~ 8639883 (-) True G127145
TU159291 lncRNA downstream 1118391 7629915 ~ 7645722 (-) False G127039
TU159209 lncRNA downstream 1639072 7120244 ~ 7125041 (-) True G126977
TU159108 lncRNA downstream 2382865 6380963 ~ 6381248 (-) True G126887
TU159089 lncRNA downstream 2428247 6334713 ~ 6335866 (-) True G126873
TU159507 lncRNA upstream 302448 9066840 ~ 9083586 (-) True G127229
TU159581 lncRNA upstream 593956 9358348 ~ 9360596 (-) True G127275
TU159606 lncRNA upstream 643801 9408193 ~ 9408469 (-) True G127291
TU159616 lncRNA upstream 691579 9455971 ~ 9468876 (-) True G127300
TU159645 lncRNA upstream 786258 9550650 ~ 9557148 (-) True G127325
AMCG00000917 mRNA downstream 99892 8662117 ~ 8664221 (-) True AMCG00000917
AMCG00000916 mRNA downstream 102482 8654002 ~ 8661631 (-) True AMCG00000916
AMCG00000909 mRNA downstream 138762 8617271 ~ 8625351 (-) True AMCG00000909
AMCG00000902 mRNA downstream 337988 8413443 ~ 8426125 (-) True AMCG00000902
AMCG00000901 mRNA downstream 419084 8327997 ~ 8345029 (-) True AMCG00000901
AMCG00000914 mRNA upstream 125834 8890226 ~ 8900361 (-) True AMCG00000914
AMCG00000915 mRNA upstream 137843 8902235 ~ 8908000 (-) True AMCG00000915
AMCG00000923 mRNA upstream 238757 9003149 ~ 9044874 (-) True AMCG00000923
AMCG00000922 mRNA upstream 281729 9046121 ~ 9048715 (-) True AMCG00000922
AMCG00000921 mRNA upstream 291352 9055744 ~ 9057523 (-) True AMCG00000921
TU159288 other downstream 1118391 7629915 ~ 7645722 (-) True G127039
TU159187 other downstream 2030296 6711958 ~ 6733817 (-) False AMCG00000888
TU158856 other downstream 3191086 5572705 ~ 5573027 (-) True G126700
TU158503 other downstream 4127597 4636096 ~ 4636516 (-) True G126427
TU158313 other downstream 5107552 3652657 ~ 3656561 (-) False AMCG00000804
TU159607 other upstream 654604 9418996 ~ 9419325 (-) True G127292
TU159787 other upstream 1510295 10274687 ~ 10278211 (-) True G127443
TU159975 other upstream 1933315 10697707 ~ 10700348 (-) False AMCG00000960
TU160686 other upstream 3967792 12732184 ~ 12751516 (-) True G128160
TU160833 other upstream 4592591 13356983 ~ 13359770 (-) True AMCG00001061

Expression Profile