RNA id: TU159607


Basic Information

Item Value
RNA id TU159607
length 330
RNA type TUCP
GC content 0.55
exon number 1
gene id G127292
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 9418996 ~ 9419325 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCCAGGCACTGGTGGTGGGGGCGGTGGCGGGGGTGGCATGGGCACTCCAGGAACAACCTCACCTTCTGGAGCCAATGGACTTACTGGGCCCACAAAGGAACCAGTAGCCCCTTCCAAGCCAGGTGGAACAAGGCAAGGGCCGGAGCCTTGCTGCGCGGAAGGAAAGATCGAGATGTCCCCGTTGCCCTTCTTCTGGATTTTTATTGTCCCTTGTTTCTCCAGTTCATTGATCTTCTTCTCCAGATTGCATTGTCTTTGGATTGCTTCGTCCTTCTCTTTCACCATCCTGCGCAAAGTGTGCACCTGCGTGTTGGCGTCTTTGTACACCTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU159606 lncRNA downstream 10527 9408193 ~ 9408469 (-) True G127291
TU159581 lncRNA downstream 58400 9358348 ~ 9360596 (-) True G127275
TU159507 lncRNA downstream 335410 9066840 ~ 9083586 (-) True G127229
TU159428 lncRNA downstream 654604 8764113 ~ 8764392 (-) True G127159
TU159409 lncRNA downstream 779113 8638596 ~ 8639883 (-) True G127145
TU159616 lncRNA upstream 36646 9455971 ~ 9468876 (-) True G127300
TU159645 lncRNA upstream 131325 9550650 ~ 9557148 (-) True G127325
TU159659 lncRNA upstream 235005 9654330 ~ 9654643 (-) True G127337
TU159669 lncRNA upstream 405471 9824796 ~ 9830690 (-) False G127346
TU159671 lncRNA upstream 405471 9824796 ~ 9830690 (-) True G127346
AMCG00000931 mRNA downstream 131520 9284104 ~ 9287476 (-) True AMCG00000931
AMCG00000925 mRNA downstream 222433 9137815 ~ 9196563 (-) True AMCG00000925
AMCG00000926 mRNA downstream 310626 9083724 ~ 9108370 (-) True AMCG00000926
AMCG00000920 mRNA downstream 342732 9072458 ~ 9076264 (-) True AMCG00000920
AMCG00000921 mRNA downstream 361473 9055744 ~ 9057523 (-) True AMCG00000921
AMCG00000932 mRNA upstream 12963 9432288 ~ 9453766 (-) True AMCG00000932
AMCG00000933 mRNA upstream 88160 9507485 ~ 9513855 (-) True AMCG00000933
AMCG00000937 mRNA upstream 396886 9816211 ~ 9822857 (-) True AMCG00000937
AMCG00000940 mRNA upstream 526246 9945571 ~ 9949996 (-) True AMCG00000940
AMCG00000942 mRNA upstream 535920 9955245 ~ 9960709 (-) True AMCG00000942
TU159288 other downstream 1773274 7629915 ~ 7645722 (-) True G127039
TU159187 other downstream 2685179 6711958 ~ 6733817 (-) False AMCG00000888
TU158856 other downstream 3845969 5572705 ~ 5573027 (-) True G126700
TU158503 other downstream 4782480 4636096 ~ 4636516 (-) True G126427
TU158313 other downstream 5762435 3652657 ~ 3656561 (-) False AMCG00000804
TU159787 other upstream 855362 10274687 ~ 10278211 (-) True G127443
TU159975 other upstream 1278382 10697707 ~ 10700348 (-) False AMCG00000960
TU160686 other upstream 3312859 12732184 ~ 12751516 (-) True G128160
TU160833 other upstream 3937658 13356983 ~ 13359770 (-) True AMCG00001061
TU161258 other upstream 5173374 14592699 ~ 14598570 (-) True G128628

Expression Profile