RNA id: TU161327


Basic Information

Item Value
RNA id TU161327
length 212
lncRNA type intronic
GC content 0.35
exon number 1
gene id G128681
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 14956841 ~ 14957052 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

attactaaaatgaaaaaaacaacctgcgcactagaccctatacccactaaactgctaaaacaatctctgccattaattattcacagaatacacaatattattaatgtctctttatcctcaggatctgttcctgaatcgtttaaaatagctgtaattaaaccacttcttaagaaatccagtgccgaccctaaccaacttaaacactatcgacc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU161320 lncRNA downstream 181202 14773562 ~ 14775639 (-) True G128676
TU161317 lncRNA downstream 181202 14773634 ~ 14775639 (-) False G128676
TU161262 lncRNA downstream 333708 14619572 ~ 14623133 (-) False G128631
TU161264 lncRNA downstream 335916 14619572 ~ 14620925 (-) True G128631
TU161250 lncRNA downstream 354511 14589025 ~ 14602330 (-) False G128624
TU161353 lncRNA upstream 114866 15071918 ~ 15073870 (-) True G128703
TU161518 lncRNA upstream 407015 15364067 ~ 15433140 (-) False AMCG00001118
TU161528 lncRNA upstream 449716 15406768 ~ 15409154 (-) True G128839
TU161524 lncRNA upstream 452158 15409210 ~ 15413192 (-) False AMCG00001119
TU161525 lncRNA upstream 452158 15409210 ~ 15413192 (-) False AMCG00001119
AMCG00001091 mRNA downstream 195574 14732692 ~ 14761267 (-) True AMCG00001091
AMCG00001093 mRNA downstream 329131 14624425 ~ 14627710 (-) True AMCG00001093
AMCG00001092 mRNA downstream 337833 14611686 ~ 14619008 (-) True AMCG00001092
AMCG00001081 mRNA downstream 803983 14149024 ~ 14152858 (-) True AMCG00001081
AMCG00001080 mRNA downstream 872055 14054414 ~ 14084786 (-) True AMCG00001080
AMCG00001097 mRNA upstream 38198 14995250 ~ 14998306 (-) True AMCG00001097
AMCG00001100 mRNA upstream 218120 15175172 ~ 15181842 (-) True AMCG00001100
AMCG00001099 mRNA upstream 228060 15185112 ~ 15187506 (-) True AMCG00001099
AMCG00001105 mRNA upstream 249841 15206893 ~ 15209203 (-) True AMCG00001105
AMCG00001106 mRNA upstream 257253 15214305 ~ 15228862 (-) True AMCG00001106
TU161258 other downstream 358271 14592699 ~ 14598570 (-) True G128628
TU160833 other downstream 1597071 13356983 ~ 13359770 (-) True AMCG00001061
TU160686 other downstream 2205325 12732184 ~ 12751516 (-) True G128160
TU159975 other downstream 4256493 10697707 ~ 10700348 (-) False AMCG00000960
TU159787 other downstream 4678630 10274687 ~ 10278211 (-) True G127443
TU161398 other upstream 222189 15179241 ~ 15180322 (-) True G128741
TU161519 other upstream 407015 15364067 ~ 15433469 (-) True AMCG00001118
TU161636 other upstream 603293 15560345 ~ 15909126 (-) False AMCG00001127
TU161965 other upstream 2215818 17172870 ~ 17173677 (-) False AMCG00001156
TU162350 other upstream 3567840 18524892 ~ 18525543 (-) False AMCG00001193

Expression Profile