Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU162458 |
| length | 632 |
| RNA type | TUCP |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G129566 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 18888765 ~ 18889757 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006091 | generation of precursor metabolites and energy | biological_process |
| GO:0042773 | ATP synthesis coupled electron transport | biological_process |
| GO:0006119 | oxidative phosphorylation | biological_process |
| GO:0022900 | electron transport chain | biological_process |
| GO:0008137 | NADH dehydrogenase (ubiquinone) activity | molecular_function |
| GO:0003954 | NADH dehydrogenase activity | molecular_function |
| GO:0016491 | oxidoreductase activity | molecular_function |
| GO:0050136 | NADH dehydrogenase (quinone) activity | molecular_function |
| GO:0016651 | oxidoreductase activity, acting on NAD(P)H | molecular_function |
| GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU162338 | lncRNA | downstream | 407809 | 18477617 ~ 18480956 (-) | True | G129465 |
| TU162305 | lncRNA | downstream | 473655 | 18413485 ~ 18415110 (-) | True | G129440 |
| TU162303 | lncRNA | downstream | 475332 | 18412854 ~ 18413433 (-) | True | G129438 |
| TU162302 | lncRNA | downstream | 476015 | 18410106 ~ 18412750 (-) | True | G129437 |
| TU162247 | lncRNA | downstream | 623493 | 18240456 ~ 18265272 (-) | True | G129394 |
| TU162463 | lncRNA | upstream | 187 | 18889944 ~ 18890146 (-) | True | G129567 |
| TU162475 | lncRNA | upstream | 10754 | 18900511 ~ 18903646 (-) | True | G129571 |
| TU162477 | lncRNA | upstream | 17387 | 18907144 ~ 18907641 (-) | True | G129573 |
| TU162502 | lncRNA | upstream | 149410 | 19039167 ~ 19041958 (-) | True | G129593 |
| TU162540 | lncRNA | upstream | 186993 | 19076750 ~ 19083163 (-) | True | G129621 |
| AMCG00001204 | mRNA | downstream | 48375 | 18804707 ~ 18840390 (-) | True | AMCG00001204 |
| AMCG00001206 | mRNA | downstream | 94774 | 18791514 ~ 18793991 (-) | True | AMCG00001206 |
| AMCG00001205 | mRNA | downstream | 99308 | 18786417 ~ 18789457 (-) | True | AMCG00001205 |
| AMCG00001200 | mRNA | downstream | 123997 | 18728264 ~ 18764768 (-) | True | AMCG00001200 |
| AMCG00001201 | mRNA | downstream | 172399 | 18642257 ~ 18716366 (-) | True | AMCG00001201 |
| AMCG00001208 | mRNA | upstream | 154200 | 19043957 ~ 19066500 (-) | True | AMCG00001208 |
| AMCG00001211 | mRNA | upstream | 210531 | 19100288 ~ 19105711 (-) | True | AMCG00001211 |
| AMCG00001213 | mRNA | upstream | 217797 | 19107554 ~ 19121606 (-) | True | AMCG00001213 |
| AMCG00001215 | mRNA | upstream | 250913 | 19140670 ~ 19151279 (-) | True | AMCG00001215 |
| AMCG00001214 | mRNA | upstream | 297742 | 19187499 ~ 19207758 (-) | True | AMCG00001214 |
| TU162357 | other | downstream | 330548 | 18555830 ~ 18558217 (-) | False | AMCG00001196 |
| TU162350 | other | downstream | 363222 | 18524892 ~ 18525543 (-) | False | AMCG00001193 |
| TU161965 | other | downstream | 1715088 | 17172870 ~ 17173677 (-) | False | AMCG00001156 |
| TU161636 | other | downstream | 2979639 | 15560345 ~ 15909126 (-) | False | AMCG00001127 |
| TU161519 | other | downstream | 3455296 | 15364067 ~ 15433469 (-) | True | AMCG00001118 |
| TU162897 | other | upstream | 2357904 | 21247661 ~ 21270383 (-) | True | AMCG00001251 |
| TU162985 | other | upstream | 2720550 | 21610307 ~ 21648508 (-) | False | AMCG00001264 |
| TU162984 | other | upstream | 2899451 | 21789208 ~ 21822820 (-) | True | G130004 |
| TU163107 | other | upstream | 3369686 | 22259443 ~ 22302448 (-) | True | AMCG00001270 |
| TU163259 | other | upstream | 3721729 | 22611486 ~ 22614286 (-) | False | G130244 |
