RNA id: TU163398


Basic Information

Item Value
RNA id TU163398
length 212
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G130364
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 23280208 ~ 23280419 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ctttcccagtctatgtttgggaaattgaaatcccccattataacagccacatccttgctacatgcagtcctgattacactgtacaatgcaacattttgctgaatatctgagttgggtggtctgtaacacactcctaccactaatcctccacatctcttgtccaaaagtttcacccacaaagattctgttccgttactgggatctaattttag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU163379 lncRNA downstream 104866 23169816 ~ 23175342 (-) True G130351
TU163298 lncRNA downstream 420532 22859397 ~ 22859676 (-) True G130278
TU163295 lncRNA downstream 457090 22796634 ~ 22823118 (-) True G130276
TU163266 lncRNA downstream 539101 22654917 ~ 22741107 (-) True G130251
TU163267 lncRNA downstream 539101 22729969 ~ 22741107 (-) False G130251
TU163401 lncRNA upstream 3057 23283476 ~ 23283727 (-) True G130367
TU163443 lncRNA upstream 259398 23539817 ~ 23555714 (-) False AMCG00001291
TU163504 lncRNA upstream 404455 23684874 ~ 23685512 (-) True G130456
TU163515 lncRNA upstream 407408 23687827 ~ 23688157 (-) True G130464
TU163517 lncRNA upstream 428301 23708720 ~ 23708968 (-) True G130466
AMCG00001289 mRNA downstream 12257 23247525 ~ 23267951 (-) True AMCG00001289
AMCG00001287 mRNA downstream 91261 23176343 ~ 23188947 (-) True AMCG00001287
AMCG00001288 mRNA downstream 117483 23122004 ~ 23162725 (-) True AMCG00001288
AMCG00001286 mRNA downstream 184598 23056691 ~ 23095610 (-) True AMCG00001286
AMCG00001283 mRNA downstream 269293 22940652 ~ 23010915 (-) True AMCG00001283
AMCG00001290 mRNA upstream 62398 23342817 ~ 23398981 (-) True AMCG00001290
AMCG00001291 mRNA upstream 229412 23509831 ~ 23547309 (-) True AMCG00001291
AMCG00001293 mRNA upstream 336052 23616471 ~ 23620922 (-) True AMCG00001293
AMCG00001295 mRNA upstream 586202 23866621 ~ 23884688 (-) True AMCG00001295
AMCG00001296 mRNA upstream 833881 24114300 ~ 24142020 (-) True AMCG00001296
TU163259 other downstream 665922 22611486 ~ 22614286 (-) False G130244
TU163107 other downstream 977760 22259443 ~ 22302448 (-) True AMCG00001270
TU162984 other downstream 1457388 21789208 ~ 21822820 (-) True G130004
TU162985 other downstream 1631700 21610307 ~ 21648508 (-) False AMCG00001264
TU162897 other downstream 2009825 21247661 ~ 21270383 (-) True AMCG00001251
TU163521 other upstream 442973 23723392 ~ 23725279 (-) True G130470
TU163698 other upstream 1124371 24404790 ~ 24419606 (-) True AMCG00001303
TU163711 other upstream 1154670 24435089 ~ 24439649 (-) True G130622
TU163736 other upstream 1346423 24626842 ~ 24646001 (-) False AMCG00001316
TU163741 other upstream 1388527 24668946 ~ 24685570 (-) False AMCG00001316

Expression Profile