RNA id: TU163527


Basic Information

Item Value
RNA id TU163527
length 225
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G130476
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 23734686 ~ 23734910 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTGCTCTGTGTCTGGGCAACCATGCGGAGCTCCTGGATCAGCTGCCCGGCACAGTCAGGGTCCTTGCTGGCAGCATGCAGCAGGGCCTTTCGAAAGGCATGGCGGCATCTCTTTTGCCGAGTTGCTGCTCTCTCCAAACGACAGAGATGCTTATATTTCTGCTGCAAGTAAGTGCAGAGCCGAGACAGCCTGTTACTCCTTGATGTTCCTATGTCATCATCGGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU163523 lncRNA downstream 5828 23728623 ~ 23728858 (-) True G130472
TU163520 lncRNA downstream 12619 23721823 ~ 23722067 (-) True G130469
TU163517 lncRNA downstream 25718 23708720 ~ 23708968 (-) True G130466
TU163515 lncRNA downstream 46529 23687827 ~ 23688157 (-) True G130464
TU163504 lncRNA downstream 49174 23684874 ~ 23685512 (-) True G130456
TU163528 lncRNA upstream 1324 23736234 ~ 23736592 (-) True G130477
TU163529 lncRNA upstream 1770 23736680 ~ 23736978 (-) True G130478
TU163530 lncRNA upstream 3226 23738136 ~ 23738438 (-) True G130479
TU163531 lncRNA upstream 4069 23738979 ~ 23739260 (-) True G130480
TU163533 lncRNA upstream 10843 23745753 ~ 23751110 (-) True G130482
AMCG00001293 mRNA downstream 113764 23616471 ~ 23620922 (-) True AMCG00001293
AMCG00001291 mRNA downstream 187377 23509831 ~ 23547309 (-) True AMCG00001291
AMCG00001290 mRNA downstream 335705 23342817 ~ 23398981 (-) True AMCG00001290
AMCG00001289 mRNA downstream 466735 23247525 ~ 23267951 (-) True AMCG00001289
AMCG00001287 mRNA downstream 545739 23176343 ~ 23188947 (-) True AMCG00001287
AMCG00001295 mRNA upstream 131711 23866621 ~ 23884688 (-) True AMCG00001295
AMCG00001296 mRNA upstream 379390 24114300 ~ 24142020 (-) True AMCG00001296
AMCG00001301 mRNA upstream 620179 24355089 ~ 24365595 (-) True AMCG00001301
AMCG00001304 mRNA upstream 639765 24374675 ~ 24375851 (-) True AMCG00001304
AMCG00001308 mRNA upstream 640994 24375904 ~ 24382811 (-) True AMCG00001308
TU163521 other downstream 9407 23723392 ~ 23725279 (-) True G130470
TU163259 other downstream 1120400 22611486 ~ 22614286 (-) False G130244
TU163107 other downstream 1432238 22259443 ~ 22302448 (-) True AMCG00001270
TU162984 other downstream 1911866 21789208 ~ 21822820 (-) True G130004
TU162985 other downstream 2086178 21610307 ~ 21648508 (-) False AMCG00001264
TU163698 other upstream 669880 24404790 ~ 24419606 (-) True AMCG00001303
TU163711 other upstream 700179 24435089 ~ 24439649 (-) True G130622
TU163736 other upstream 891932 24626842 ~ 24646001 (-) False AMCG00001316
TU163741 other upstream 934036 24668946 ~ 24685570 (-) False AMCG00001316
TU163769 other upstream 1091383 24826293 ~ 24836873 (-) True G130667

Expression Profile