RNA id: TU163646



Basic Information


Item Value
RNA id TU163646
length 186
lncRNA type inter_gene
GC content 0.47
exon number 3
gene id G130574
representative False

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 24190999 ~ 24194404 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TTATGCTTTCTATTTCTTCTGGTGTTTTTCAGTGATCCAGTGACAGTACGAGCTTATGAAGTCGGCAGTCATGAAGAGCTCCAAAGAAGCCATGCAGACCGCAGCCAAGGAGTTGCTGCAGTTTGTGAACCGCGGAGTGTCTCCCTACCACGATTACTAGGGATAGGACAGTATACAATTTCCACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU163588 lncRNA downstream 273781 23916993 ~ 23917218 (-) True G130528
TU163534 lncRNA downstream 420136 23770409 ~ 23770863 (-) True G130483
TU163533 lncRNA downstream 439889 23745753 ~ 23751110 (-) True G130482
TU163531 lncRNA downstream 451739 23738979 ~ 23739260 (-) True G130480
TU163530 lncRNA downstream 452561 23738136 ~ 23738438 (-) True G130479
TU163667 lncRNA upstream 135846 24330250 ~ 24354241 (-) True G130591
TU163692 lncRNA upstream 200122 24394526 ~ 24400536 (-) True AMCG00001306
TU163699 lncRNA upstream 219699 24414103 ~ 24419606 (-) False AMCG00001303
TU163729 lncRNA upstream 382570 24576974 ~ 24578958 (-) True G130633
TU163744 lncRNA upstream 500404 24694808 ~ 24695031 (-) True G130646
AMCG00001296 mRNA downstream 48979 24114300 ~ 24142020 (-) True AMCG00001296
AMCG00001295 mRNA downstream 306311 23866621 ~ 23884688 (-) True AMCG00001295
AMCG00001293 mRNA downstream 570077 23616471 ~ 23620922 (-) True AMCG00001293
AMCG00001291 mRNA downstream 643690 23509831 ~ 23547309 (-) True AMCG00001291
AMCG00001290 mRNA downstream 792018 23342817 ~ 23398981 (-) True AMCG00001290
AMCG00001301 mRNA upstream 160685 24355089 ~ 24365595 (-) True AMCG00001301
AMCG00001304 mRNA upstream 180271 24374675 ~ 24375851 (-) True AMCG00001304
AMCG00001308 mRNA upstream 181500 24375904 ~ 24382811 (-) True AMCG00001308
AMCG00001306 mRNA upstream 205375 24399779 ~ 24400546 (-) False AMCG00001306
AMCG00001303 mRNA upstream 210383 24404787 ~ 24419606 (-) False AMCG00001303
TU163521 other downstream 465720 23723392 ~ 23725279 (-) True G130470
TU163259 other downstream 1576713 22611486 ~ 22614286 (-) False G130244
TU163107 other downstream 1888551 22259443 ~ 22302448 (-) True AMCG00001270
TU162984 other downstream 2368179 21789208 ~ 21822820 (-) True G130004
TU162985 other downstream 2542491 21610307 ~ 21648508 (-) False AMCG00001264
TU163698 other upstream 210386 24404790 ~ 24419606 (-) True AMCG00001303
TU163711 other upstream 240685 24435089 ~ 24439649 (-) True G130622
TU163736 other upstream 432438 24626842 ~ 24646001 (-) False AMCG00001316
TU163741 other upstream 474542 24668946 ~ 24685570 (-) False AMCG00001316
TU163769 other upstream 631889 24826293 ~ 24836873 (-) True G130667

Expression Profile