RNA id: TU163781


Basic Information

Item Value
RNA id TU163781
length 206
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G130678
representative True

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 24973879 ~ 24974084 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

caggattcgtgataaggtgatactataaattcacttcttaaattgaaatttataagtgtaccttacgctacataatTGGTGCCCCGTGTGAGGAATCTGAAAAGAACTAATTTCTGTAATAGTTATTGGATAGCTTTGTCCAGAAATCCAGATTCCAAAGTTTTGAAACAAGAAAACTTTTGTAGGCGCGATACACTGTTTGTACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU163774 lncRNA downstream 58898 24914721 ~ 24914981 (-) True G130671
TU163744 lncRNA downstream 278848 24694808 ~ 24695031 (-) True G130646
TU163729 lncRNA downstream 394921 24576974 ~ 24578958 (-) True G130633
TU163699 lncRNA downstream 554273 24414103 ~ 24419606 (-) False AMCG00001303
TU163692 lncRNA downstream 573343 24394526 ~ 24400536 (-) True AMCG00001306
TU163789 lncRNA upstream 50704 25024788 ~ 25025012 (-) True G130686
TU163793 lncRNA upstream 82537 25056621 ~ 25056920 (-) True G130690
TU163794 lncRNA upstream 110495 25084579 ~ 25084785 (-) True G130691
TU163796 lncRNA upstream 112575 25086659 ~ 25086879 (-) True G130693
TU163801 lncRNA upstream 157338 25131422 ~ 25131795 (-) True G130698
AMCG00001320 mRNA downstream 108563 24806005 ~ 24865316 (-) True AMCG00001320
AMCG00001318 mRNA downstream 256823 24716537 ~ 24717056 (-) True AMCG00001318
AMCG00001316 mRNA downstream 300769 24597569 ~ 24673110 (-) True AMCG00001316
AMCG00001305 mRNA downstream 502800 24439406 ~ 24471079 (-) True AMCG00001305
AMCG00001307 mRNA downstream 537180 24422147 ~ 24436699 (-) True AMCG00001307
AMCG00001321 mRNA upstream 8497 24982581 ~ 25010615 (-) True AMCG00001321
AMCG00001323 mRNA upstream 245018 25219102 ~ 25223511 (-) True AMCG00001323
AMCG00001326 mRNA upstream 269561 25243645 ~ 25246650 (-) True AMCG00001326
AMCG00001327 mRNA upstream 301735 25275819 ~ 25279969 (-) True AMCG00001327
AMCG00001336 mRNA upstream 603604 25577688 ~ 25584557 (-) True AMCG00001336
TU163769 other downstream 137006 24826293 ~ 24836873 (-) True G130667
TU163741 other downstream 288309 24668946 ~ 24685570 (-) False AMCG00001316
TU163736 other downstream 327878 24626842 ~ 24646001 (-) False AMCG00001316
TU163711 other downstream 534230 24435089 ~ 24439649 (-) True G130622
TU163698 other downstream 554273 24404790 ~ 24419606 (-) True AMCG00001303
TU163842 other upstream 248812 25222896 ~ 25224928 (-) True G130735
TU163843 other upstream 248812 25222896 ~ 25246452 (-) False G130735
TU163851 other upstream 301718 25275802 ~ 25277397 (-) False AMCG00001327
TU163889 other upstream 415143 25389227 ~ 25413847 (-) True G130767
TU163894 other upstream 447840 25421924 ~ 25423354 (-) True G130771

Expression Profile